Jun 27 2024
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PyMOL
a widely used molecular visualization package developed by Warren DeLano, now maintained by Schödinger, LLC. This installation includes official incentive builds of PyMOL.
Updated versions:
3.0.0 | OS X INTEL
2.6.0 | OS X INTEL
2.5.5_legacy | OS X INTEL
2.5.5 | OS X INTEL
2.2.3 | OS X INTEL
3.0.2 | Linux 64
3.0.0 | Linux 64
2.6.0 | Linux 64
2.5.5 | Linux 64
2.2.3 | Linux 64
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Jun 17 2024
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cryoDRGN-AI
a neural network-based algorithm for ab initio heterogeneous cryo-EM reconstruction.
Updated versions:
1.0.0 | OS X INTEL
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Jun 17 2024
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AlphaPulldown
a Python package that streamlines protein-protein interaction screens and high-throughput modelling of higher-order oligomers using AlphaFold-Multimer.
Updated versions:
2.0.0b2 | Linux 64
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Jun 13 2024
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code-server
a tool that makes Run VS Code on any machine anywhere and access it in the browser.
Updated versions:
4.90.1 | Linux 64
4.90.1 | OS X INTEL
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Jun 13 2024
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MMseqs2
an ultra fast and sensitive sequence search and clustering suite
Updated versions:
15.6f452 | Linux 64
15.6f452 | OS X INTEL
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Jun 12 2024
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Warp
a set of tools for cryo-EM and cryo-ET data processing including, among other tools: Warp, M, WarpTools, MTools, MCore, and Noise2Map.
Updated versions:
2.0.0 | Linux 64
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Jun 11 2024
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Bowtie 2
an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences.
Updated versions:
2.5.4 | Linux 64
2.5.4 | OS X INTEL
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Jun 11 2024
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Warp
a set of tools for cryo-EM and cryo-ET data processing including, among other tools: Warp, M, WarpTools, MTools, MCore, and Noise2Map.
Updated versions:
2.0.0dev11 | Linux 64
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Jun 10 2024
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AWS CLI
(Amazon Web Services Command Line Interface) a command line interface tool to manage multiple Amazon Web Services and automate them through scripts.
Updated versions:
2.16.4 | Linux 64
2.16.4 | OS X INTEL
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Jun 06 2024
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GROMACS
a versatile package that performs molecular dynamics of proteins, lipids and nucleic acids.
Updated versions:
2024.1_cu11.5.2 | Linux 64
2024.1_arm | OS X INTEL
2024.1 | OS X INTEL
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Jun 03 2024
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OpenJDK
(Open Java Development Kit) a free and open source implementation of the Java Platform, Standard Edition (Java SE).
Updated versions:
zulu21 | Linux 64
zulu17 | Linux 64
zulu21 | OS X INTEL
zulu17 | OS X INTEL
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Jun 02 2024
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EMReady
a tool that improves the quality and interpretability of cryo-EM maps by local and non-local deep learning
Updated versions:
2.0 | Linux 64
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