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SBGridTV

  • You'll find SBGrid in 275 structural biology labs located at 85 different institutions in 18 countries around the world. See full map and read more in eLIFE.

  • Kevin Corbett's structure of C. elegans PCH-2. Read the story and watch the animated gif.

  • The thrombin:anophelin complex (PNAS 109, E3649-E3658) from the lab of Pedro José Barbosa Pereira. Read more about Dr. Pereira's background and current research in our recent webtale.

  • A hexameric building block of the capsid of the Bovine Leukemia Virus from Alejandro Buschiazzo's group.

  • Water molecules from an EM structure. Read more in our story on Bridget Carragher and Clint Potter from the New York Structural Biology Center.

  • Jennifer Doudna's Cas9 enzyme in the CRISPR pathway, published in Science Read more in her webtale.

  • Professor Catherine Drennan of MIT

    The SBGrid Consortium provides structural biologists worldwide with access to the software they need to discover the shapes of the molecules of life. Read more in eLIFE.

  • The chromatophore vesicle of purple bacteria comprises hundreds of cooperating proteins to convert sunlight into chemical energy. Image Credit: J. Stone, M. Sener, K. Schulten. Read more.

  • Jalview Developer Geoff Barton's desk with the JalviewAbacus (right) and displayed a dendrogram (tree) for the set of sequences shown in the alignment, using Jalview linked to Chimera. Read the full story here.

  • A crystal structure from James Berger's group shows how the heterohexameric origin recognition complex (ORC) can switch between two conformations.

  • From Michael Sattler's group: the ternary complex involving the tandem RNA recognition motif domains of Sxl, a cold-shock domain of the protein Unr bound to a specific RNA sequence motif. Read the details.

  •  Project MAC display system, circa 1965,

    The Project MAC display system, circa 1965. Read more about the history of molecular graphics software and UCSF Chimera in our SBGrid Tale featuring Bob Langridge and Tom Ferrin.

Recent Software Updates:

Name Description Date
pdb_extract

The pdb_extract Program Suite contains tools and examples for extracting mmCIF data from structure determination applications.

May 17
CP2K

a quantum chemistry and solid state physics software package that can perform atomistic simulations of solid state, liquid, molecular, periodic, material, crystal, and...

May 15
RELION

(REgularised LIkelihood OptimisatioN) a stand-alone computer program for Maximum A Posteriori (MAP) refinement of (multiple) 3D reconstructions or 2D class averages in...

May 05
ImageMagick

a software suite to create, edit, compose, or convert bitmap images.

May 05
PyTOM

unifies standard tomogram processing steps in a single python-based toolbox. For subtomogram averaging, we implemented an adaptive adjustment of scoring and sampling t...

May 04
PHENIX

(Python-based Hierarchical Environment for INtegrated Xtallography) a software suite for the automated determination of molecular structures using X-ray crystallograph...

May 04
ORCA

an electronic structure program package that is a flexible, efficient, and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscop...

May 04
Thanks to the National Science Foundation

With Partial Support from the National Science Foundation Research Coordination Network MCB #0639193 and NSF EAGER #1448069. Please cite SBGrid's eLife paper and follow our publication guidelines.

Latest news

SBGrid/Harvard Shield

Become an SBGrid Ambassador!

Are you as passionate as we are about structural biology computations? At SBGrid, thinking about structure determination workflows, software, data, and computing infrastructures is fundamental to our everyday work. We ...

SBGrid Lunch Break with Andrew Orry

Join us on May 16th to hear from Andrew Orry, Senior Scientist at MolSoft LLC. Dr. Orry will introduce us to ICM-Browser-Pro for 3D Molecular Graphics and Protein Structure Analysis. ...

SBGrid Lunch Break with Jesse Hopkins

Join us on July 25th to hear from Jesse Hopkins, Postdoctoral Researcher at Cornell University will talk about Analyzing Biological Small Angle X-ray Scattering Data Using RAW.

# ...

SBGrid Lunch Break with Trent Balius

Join us on June 20th to hear from Trent Balius, Postdoctoral Scholar, Shoichet Lab in University of California, San Francisco on DOCK: Where it is and where its going.
...

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