SBGrid Consortium homepage

AR-Decon, which stands for correcting Anisotropic Resolution by Deconvolution, is a computational pipeline designed to enhance the quality of three-dimensional maps that suffer from anisotropic resolutions, often resulting from datasets with preferred orientations. By applying advanced deconvolution techniques, AR-Decon corrects these resolution discrepancies, leading to more accurate and isotropic 3D maps.

a tool of the next-generation molecular visualization program from the Resource for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. Compared to Chimera, ChimeraX has improved graphics (e.g. interactive ambient shadows); faster handling of large structures (millions of atoms); and a more modern, single-window user interface.

a powerful and comprehensive suite of molecular biology and NGS analysis tools.

a portable command-line driven graphing utility originally created to allow scientists and students to visualize mathematical functions and data interactively. It has grown to support many non-interactive uses such as web scripting. It is also used as a plotting engine by third-party applications like CCP4 and Octave.

a program suite for small-angle scattering (SAXS) data analysis from biological macromolecules.

a tool of the next-generation molecular visualization program from the Resource for Biocomputing, Visualization, and Informatics (RBVI), following UCSF Chimera. Compared to Chimera, ChimeraX has improved graphics (e.g. interactive ambient shadows); faster handling of large structures (millions of atoms); and a more modern, single-window user interface.

a scientific image processing suite with a particular focus on single particle reconstruction from cryoEM images. EMAN2 is a complete refactoring of the original EMAN1 library and contains the SPARX applications.

Tomotools provides scripts for making cryo-electron tomography a bit easier

is a free and open-source platform for analyzing and understanding medical image data.

Visualize template matching results from Warp