Supported Applications

Bowtie 2

  • Description

    an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install bowtie-2 Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Primary Citation*

    B. Langmead and S. L. Salzberg. 2012. Fast gapped-read alignment with Bowtie 2. Nature Methods. Nature Publishing Group, a division of Macmillan Publishers Limited. 9(4): 357-359.

    • *Full citation information available through