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Supported Applications

MMseqs2

  • Description

    an ultra fast and sensitive sequence search and clustering suite

  • Usage

    To list all executables provided by MMseqs2, run: $ sbgrid-list mmseqs2 Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install mmseqs2 Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    M. Mirdita, M. Steinegger, F. Breitwieser, J. Söding, , and E. L. Karin. 2021. Fast and sensitive taxonomic assignment to metagenomic contigs. Bioinformatics. Oxford Academic. 37(18): 3029-3031.


    • *Full citation information available through

  • Keywords

    Sequence Alignment Analysis

  • Default Versions

    Linux 64:  15.6f452 (215.5 MB)
    OS X INTEL:  15.6f452 (190.3 MB)

  • Other Versions

      Linux 64:

      13.45111 (19.0 MB) , 14-7e284 (299.5 MB)

    • OS X INTEL:

      13.45111 (6.6 MB) , 14.7e284 (14.1 MB)

  • Developers

    Johannes Soeding, Martin Steinegger

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