Topic: CCP-EM: software for cryo-EM
Presenter: Colin Palmer, PhD - Science and Technology Facilities Council
Recorded on May 22, 2020
Host: Shaun Rawson
Topic: Model building and validation in CCP-EM
Presenter: Colin Palmer, Computational Scientist, Science & Technology Facilities Council
Recorded on: July 23, 2019
Host: Jason Key
Topic: Cinderella
Presenter: Thorsten Wagner, Post-doctoral Fellow, Max Planck Institute of Molecular Physiology
Host: Jason Key
Recorded on March 10, 2020
Topic: CryoDRGN: Deep generative models for reconstructing heterogeneous protein structures from cryo-EM
Speaker: Ellen Zhong, MIT, Laboratories of Bonnie Berger and Joey Davis
Host: Shaun Rawson
Recorded on: May 15, 2020
Topic: crYOLO and its utilization in feedback guided real-time processing
Speaker: Dr. Thorsten Wagner, Max-Planck-Institute of Molecular Physiology
Host: Pete Meyer
Recorded on May 29, 2020
Topic: Fast, accurate and easy particle picking with crYOLO
Presenter: Thorsten Wagner, Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology
Host: Jason Key
Recorded on: May 28, 2019
Topic: In-situ and in-vitro subtomogram averaging to subnanometer resolution using EMAN2.3
Presenter: Steven J Ludtke, Ph.D., Professor, Baylor College of Medicine
Recorded on November 12, 2019
Host: Jason Key
Topic: A quick introduction to EMAN2.1 for CryoEM Single Particle Analysis
Presenter: Steven Ludtke, Ph.D., Professor, Baylor College of Medicine
Host: Jason Key
Recorded on April 15, 2015
Topic: EMAN2.2 for Single Particle Analysis and In-situ Structural Biology
Presenter: Steven Ludtke, Ph.D.
Professor of Biochemistry - Baylor College of Medicine
Co-Director - National Center for Macromolecular Imaging
Co-Director - Center for Computational and Integrative Biomedical Research
Date Recorded: November 14, 2017
Host: Jason Key
Topic: Modeling Macromolecular Structures with Gorgon
Presenter: Matt Baker, Ph.D., Instructor, Department of Biochemistry and Molecular Biology, Baylor College of Medicine
Host: Jason Key
Recorded on April 10th, 2014
Topic: The recent progress of high-throughput cryo electron microscopy and cryo electron tomography at UCSF
Presenter: Dr. Shawn Zheng, University of California, San Francisco
Host: Shaun Rawson
Recorded on April 29, 2020
Topic: PARTICLE: an Integrated Computing Platform for Single-Particle Electron Microscopy
Presenter: James Chen, Ph.D., Research Scientist, Dept of Biology, MIT
Host: Piotr Sliz
Recorded on October 4, 2012
Topic: RELION - Exploiting prior knowledge about biological macromolecules in cryo-EM structure determination
Presenter: Dari Kimanius, Ph.D., MRC Laboratory of Molecular Biology
Host: Shaun Rawson
Recorded on June 2, 2020
Topic: RELION
Presenter: Sjors Scheres, Group Leader
Medical Research Council, The Laboratory of Molecular Biology
Host: Jason Key
Recorded on March 24, 2015
Topic : RELION-3: new tools for automated high-resolution cryo-EM structure determination
Presenter: Sjors Scheres, Group Leader, MRC Laboratory of Molecular Biology, UK
Host: Jason Key / Shaun Rawson
Recorded: November 6, 2018
Topic: Quo Vaids Scipion
Presenter: Pablo Conesa, Senior Software Developer, National Center for Biotechnology
Host: Shaun Rawson
Recorded on April 21, 2020
Topic: Using Scipion for Stream Image Processing at Cryo-EM Facilities
Presenter: José Miguel de la Rosa Trevin, PhD, Scientific Software Engineer, SciLifeLab, Stockholm University, Sweden
Host: Jason Key
Recorded on June 12, 2018
Topic: Scipion 3.0
Presenter: Jose Miguel de la Rosa Trevin, Ph.D., Research Engineer, Science for Life Laboratory, Stockholm University
Host: Jason Key
Recorded on October 20, 2020
Single Particle EM Computational Challenges
Topic: Protein Structure Determination with Single Particle Electron Microscopy - Computational Challenges
Presenter: Pawel Penczek, Ph.D., Professor and Director, Structural Biology Imaging Center, University of Texas Health Science Center at Houston
Host: Jason Key
Recorded on Jan 20, 2015
Topic: Combining Structures from Different Biophysical Origins with Situs
Presenter: Willy Wriggers, Director, biomachina.org, Professor, Mechanical & Aerospace Engineering, Old Dominion University
Host: Jason Key
Recorded on October 4, 2016