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SBGridTV

Webinars

BioGrids for SBGrid Users

  • Topic: BioGrids for SBGrid Users
    Presenter: James Vincent, Ph.D., Harvard Medical School
    Topic: BioGrids for SBGrid Users

    BioGrids in an SBGrid-style collection of ~ 500 open source bioinformatics software titles. This software stack, which includes collections for high-throughput sequencing, genomics, proteomics, visualization, image analysis, etc, is available to all SBGrid members as an add-on option, and to all users in Harvard Medical School and Boston Children's Hospital labs as part of an institutional subscription.

    Recorded on October 12, 2021
    Host: Jason Key

    BioXTAS RAW

  • Topic: Analyzing Biological Small Angle X-ray Scattering Data Using RAW
    Presenter: Jesse Hopkins, Ph.D., Postdoctoral Research, Cornell University

    For more information on RAW: https://sourceforge.net/projects/biox...

    Host: Jason Key
    Recorded on July 26, 2017

    CCP-EM

  • Topic: Model building and validation in CCP-EM
    Presenter: Colin Palmer, Computational Scientist, Science & Technology Facilities Council

    Recorded on: July 23, 2019
    Host: Jason Key

    crYOLO

  • Topic: Fast, accurate and easy particle picking with crYOLO
    Presenter: Thorsten Wagner, Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology

    Host: Jason Key
    Recorded on: May 28, 2019

    Daniel Wrapp - Structural insights into SARS-CoV-2 S and implications for therapeutic development

  • Topic: Structural insights into SARS-CoV-2 S and implications for therapeutic development
    Presenter: Daniel Wrapp, Dartmouth graduate student, Jason McLellan's lab at The University of Texas at Austin

    Host: Shaun Rawson
    Recorded on September 22, 2020

    DENSS: Ab Initio Electron Density Maps from Biological SAXS Data

  • Topic: DENSS: Ab Initio Electron Density Maps from Biological SAXS Data
    Presenter: Thomas Grant, Ph.D., Research Assistant Professor, University of Buffalo, Hauptman-Woodward Institute

    Host: Jason Key
    Recorded on: January 22, 2019

    Summary: SAXS is an experimental technique used to analyze the molecular structures of a wide variety of biological and non-biological samples in solution. Here I present a method for calculating electron density maps directly from solution scattering data. After introducing the approach, I will demonstrate a brief tutorial of the software DENSS (DENsity from Solution Scattering).

    Dr. Dhirendra Simanshu - Structural and mechanistic insights into the RAS biology

  • Topic: Structural and mechanistic insights into the RAS biology

    Presenter: Dr. Dhirendra Simanshu, NCI RAS Initiative, Frederick National Laboratory for Cancer Research




    Host: Pete Meyer

    Recorded on April 20, 2021

    Enhance Success of Crystallization: Choosing Crystallization Method

  • Topic: Simple Ways to Enhance the Success of Crystallization Trials: Part III - Choosing your Method of Crystallization
    Presenter: Naomi Chayen, Professor, Imperial College London

    Host: Jason Key
    Recorded on December 4, 2013

    Enhance Success of Crystallization: Maximize Hits & Improve Crystal Quality

  • Topic: Simple Ways to Enhance the Success of Crystallization Trials: Part II - Dynamic Experiments to Maximize Hits and Improve Crystal Quality
    Presenter: Naomi Chayen, Professor, Imperial College London

    SBGrid Host: Jason Key
    Recorded on December 4, 2013

    Enhance Success of Crystallization: Practical Crystallization Techniques

  • Topic: Simple Ways to Enhance the Success of Crystallization Trials: Part I - Practical Crystallization Techniques
    Presenter: Naomi Chayen, Professor, Imperial College London

    Recorded on: December 4, 2013

    Evan Worden, PhD - Mechanisms of crosstalk between histone ubiquitination and methylation

  • Topic: Mechanisms of crosstalk between histone ubiquitination and methylation
    Presenter: Evan Worden, Cynthia Wolberger's Laboratory, Johns Hopkins University School of Medicine

    Thanks to Evan for persevering through the fire alarm, relocating and adding a face mask before continuing with his presentation!

    Host: Jason Key
    Recorded on June 30, 2020

    Faster and smaller macromolecular crystallography at Diamond Light Source

  • Topic: Hot beams and cool crystals. Faster and smaller macromolecular crystallography at Diamond Light Source
    Presenter: Robin Owen, Principal Beamline Scientist, I24 Diamond Light Source.

    Host: Goran Malojcic
    Recorded on July 25, 2014

    Geneious

  • Topic: Geneious (Custom BLAST, workflow builder, annotation tools, CRISPER tools)
    Presenter: Christian Olsen, Field Application Scientist at
    Biomatters, Inc

    Host: Jason Key
    Recorded on July 26, 2016

    Geneious R7

  • Topic: Geneious R7: Sequence Analysis Tool for Biologists
    Presenter: Christian Olsen, Biomatters, Inc.

    Host: Jason Key
    Recorded on Sept 9th, 2014

    Geneious R7 (part II)

  • Topic: Geneious R7: Molecular Cloning Tools for Biologists
    Presenter: Christian Olsen, Biomatters, Inc.

    Host: Jason Key
    Recorded on September 30, 2014

    Getting Started with SBGrid

  • Topic: Getting Started with SBGrid
    Presenter: Jason Key, SBGrid Consortium, Harvard Medical School

    Recorded on October 29, 2014

    ICM-Browser-Pro

  • Topic: ICM-Browser-Pro: 3D Molecular Graphics and Protein Structure Analysis
    Presenter: Andrew Orry, Ph.D. , Senior Scientist, Molsoft LLC

    Host: Pete Meyer
    Recorded on May 16, 2017

    ISOLDE

  • Topic: ISOLDE: Bringing structural biology to life
    Presenter: Tristan Croll, Research Fellow, Cambridge Institute for Medical Research

    Host: Jason Key
    Recorded on: September 24, 2019

    ISOLDE

  • Topic: ISOLDE

    Presenter: Dr. Tristan Croll, Cambridge Institute for Medical Research


    Recorded on April 24, 2020
    Host: Pete Meyer

    Jason Key, Ph.D. - New SBGrid GUI-based software installation manager

  • Topic: New SBGrid GUI-based software installation manager
    Presenter: Jason Key, Ph.D., SBGrid, Harvard Medical School


    Recorded on April 13, 2021

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