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PDBStat

  • PDBStat

    • Topic: PDBStat
    Presenter: Roberto Tejero, Associate Professor, University of Valencia, Spain

    Host: Jason Key
    Recorded on January 28, 2016

    PyMOL

  • PyMOL

    • Presenter: Thomas Stewart, Ph.D., Schrödinger
    Topic: A new approach to visual presets in PyMOL (upcoming in PyMOL 3.0)

    Recorded on March 1, 2022
    Host: Pete Meyer

    PyMOL

  • PyMOL

    • SBGrid webinars are hosted with partial support from the NIH R25 Continuing Education for Structural Biology Mentors #GM151273, in collaboration with Co-PI Jamaine Davis of Belmont University.

    Topic:
    Upcoming improvements to visualization and CryoEM support in PyMOL.

    Jarrett Johnson, Ph.D.
    Senior Developer, Schrödinger, Inc.

    Host: Pete Meyer
    Recorded on May 12, 2026

    For more information on PyMOL:
    https://sbgrid.org/software/titles/pymol

    PyMOL

  • PyMOL

    • Topic: PyMOL Demo, Hints, and New Features
    Presenter: Thomas Holder, PyMOL Developer, Schrodinger

    Recorded on March 7, 2013

    PyMOL

  • PyMOL

    • Topic: Communicating your research results using PyMOL
    Presenter: Daniel Cappel, Senior Applications Scientist, Schrödinger, Inc.

    Host: Jason Key
    Recorded on September 13, 2016

    UCSF Chimera

  • UCSF Chimera

    • Topic: Analyzing Molecular Assemblies with UCSF Chimera"
    Presenter: Tom Goddard, Programmer/Analyst, Resource for Biocomputing, Visualization, and Informatics, UCSF

    Host: Jason Key
    Recordeed on February 7, 2013

    Using AlphaFold protein structures in ChimeraX for cryoEM modeling

  • Using AlphaFold protein structures in ChimeraX for cryoEM modeling

    • Topic: Using AlphaFold protein structures in ChimeraX for cryoEM modeling

    Presenter: Tom Goddard, UCSF Resource for Biocomputing, Visualization, and Informatics

    Q&A session also includes Shaun Rawson, who presented during this session on "Effective on-the-fly and downstream processing of CryoEM data." See https://youtu.be/ra2sVFEPtN8

    Learn more on the ChimeraX website:
    https://www.rbvi.ucsf.edu/chimerax/data/alphafold-nov2021/af_sbgrid.html

    This talk was presented as part of the SBGrid Australasian III Mini-series - CryoEM: from Sample to Structure and should appeal to both novice and expert structural biologists.
    See the full mini-series lineup at https://sbgrid.org/news/sbgrid-university-otago-webinar-series.

    VMD

  • VMD

    • Topic: VMD: Preparing, Analyzing, and Visualizing Molecular Dynamics Simulations

    Presenters: John Stone, University of Illinois Urbana-Champaign and Abhishek Singharoy, Arizona State University


    Host: Jason Key
    Date Recorded: January 28, 2020

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