Software Updates

GeRelion

a GPU-enhanced version of RELION that dramatically speeds up 2D/3D classification and 3D auto-refine.

iMODFit

an efficient tool for flexible fitting of atomic structures into EM maps based on Normal Mode Analysis in internal Coordinates.

em2em

a program to convert images from/to formats used in the "electron microscopical community" (3DEM)

XDSAPP

a graphical user interface for processing diffraction data sets using XDS. It automates the data processing and generates graphical plots of various data set statistics provided by XDS and presenting new features of the dataset, such as radiation decay or the presence of pseudo-translational symmetry and/or twinning, using additional software. Generates intensity files suitable for CCP4, SHELX, and CNS.

TeX Live

a system that cleans up raw data files and converts them to pdf format with LaTex. Offers an easy way to get up and running with the TeX document production system.

Molprobity

a protein structure analysis platform offering quality validation for 3D structures of proteins, nucleic acids and complexes.

QuShape

a comprehensive, platform-independent, user-friendly, and complete software package that enables efficient, reliable, highly automated, and accurate analysis of high-throughput capillary electrophoresis-detected nucleic acid chemical probing experiments.

SIMPLE

(Single-particle IMage Processing Linux Engine) does ab initio 3D reconstruction (programs cluster & origami), heterogeneity analysis (programs cluster, origami & cycler), and high-resolution refinement (programs align, reconstruct, automask & cycler).