Join us for our monthly live webinar series in which we feature contributing developers demonstrating their software, highlighting new features, and previewing future developments. You'll hear the latest news and have opportunity to ask questions directly relevant to your research. Be sure to subscribe to SBGridTV to receive alerts when we post new recordings and view our full collection of past tutorials.
Up next: Phenix/DivCon
September 25th at 12pm
XModeScore: using crystallography to determine protonation states, fragment binding modes, and flip-states
Lance Westerhoff
President & General Manager
QuantumBio
To find out more about Phenix/DivCon, read the publication or explore the product page for tutorials, examples, and a user manual.
Webinar connection instructions: We are now using BlueJeans to connect for webinars. Connection instructions:
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Join us on May 22nd to hear from Giovanni Bussi from SISSA, Trieste and Massimiliano Bonomi, from the University of Cambridge, on Analyzing and enhancing molecular dynamics simulations with PLUMED.
Analyzing and enhancing molecular dynamics simulations with PLUMED
Tuesday, May 22nd at 12:00pm EDT
Giovanni Bussi -- Associate Professor, SISSA, Trieste, Italy
Massimiliano Bonomi -- Postdoc, University of Cambridge, Vendruscolo Group
Host: Jason Key
For more information on PLUMED, visit the website http://www.plumed.org/, browse the manual, check out Github: http://github.com/plumed, and read these publications:
- PLUMED: A portable plugin for free-energy calculations with molecular dynamics. [Abstract] (arxiv.org/abs/0902.0874)
- PLUMED 2: New feathers for an old bird. [Abstract] (arxiv.org/abs/1310.0980)
Webinar connection instructions: We are now using BlueJeans to ...
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Join us on November 14th to hear about the latest updates to EMAN2.2 from Baylor College of Medicine Professor, Steven Ludtke.
- EMAN2.2 for Single Particle Analysis and In-situ Structural Biology
Tuesday, November 14th at 12:00pm EST
Steven Ludtke, Ph.D.
Professor of Biochemistry - Baylor College of Medicine
Co-Director - National Center for Macromolecular Imaging
Co-Director - Center for Computational and Integrative Biomedical Research
EMAN2 has undergone dramatic changes in the last year, both in expanding its capabilities to in-situ (CryoET) segmentation and high-resolution high-speed subtomogram averaging, as well as with traditional single particle analysis. New deep-learning technology in EMAN2 permits automatic segmentation of cellular tomograms as well as highly accurate particle picking in single particle analysis. Even more recently, a novel computational approach based on robust invariants ...
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Join us on September 19th to hear from SBGrid's technical lead Jason Key. Jason will introduce some of the newest tools available to SBGrid users, including our new user environment and installation tools.
What's new at SBGrid: SBGrid Environment and Installation Tools
Tuesday, September 19th at 12:00pm EDT
Jason Key, Ph.D.
Technical Lead, SBGrid Consortium
Lecturer, Harvard Medical School
Webinar connection instructions: We are using the FUZE Meeting application to host our webinars, which is compatible with Mac, Linux, and Windows computers. To connect, follow the Meeting URL and enter the meeting number:
Join us on July 25th to hear from Jesse Hopkins, Postdoctoral Researcher at Cornell University will talk about Analyzing Biological Small Angle X-ray Scattering Data Using RAW.
Analyzing Biological Small Angle X-ray Scattering Data Using RAW
Tuesday, July 25th at 12:00pm EDT
Jesse Hopkins, Ph.D.
Postdoctoral Research
Cornell University
Host: Jason Key
Abstract. BioXTAS RAW is a program for analysis of Small-Angle X-ray Scattering (SAXS) data. The software enables: creation of 1D scattering profiles from 2D detector images, standard data operations such as averaging and subtraction, analysis of radius of gyration (Rg) and molecular weight, and advanced analysis using GNOM and DAMMIF. It also allows easy processing of inline SEC-SAXS data and data deconvolution using the evolving factor analysis (EFA) method.
Learn more about BioXTAS RAW ...
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