Webinars
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Topic: Topaz: particle picking with positive-unlabeled learning
Speaker: Tristan Bepler, MIT
Host: Jason Key
Recorded on Feb 26, 2019
Topic: Dynamic Allostery in PI3Kɑ activation: A computational approach
Presenter: Mayukh Chakrabarti, Mario Amzel's group, Johns Hopkins University
Host: Pete Meyer
Recorded on May 22, 2020
Topic: Structural basis of substrate selectivity of viperin, an antiviral radical SAM enzyme
Presenter: Mike Fenwick, PhD, Steve Ealick's group, Cornell University
Host: Pete Meyer
Recorded on May 22, 2020
Topic: TranSPHIRE
Presenter: Markus Stabrin, Max Planck Institute of Molecular Physiology
TranSPHIRE
Host: Shaun Rawson
Recorded on Tuesday, October 27th
Topic: Analyzing Molecular Assemblies with UCSF Chimera"
Presenter: Tom Goddard, Programmer/Analyst, Resource for Biocomputing, Visualization, and Informatics, UCSF
Host: Jason Key
Recordeed on February 7, 2013
Topic: Using AlphaFold protein structures in ChimeraX for cryoEM modeling
Presenter: Tom Goddard, UCSF Resource for Biocomputing, Visualization, and Informatics
Q&A session also includes Shaun Rawson, who presented during this session on "Effective on-the-fly and downstream processing of CryoEM data." See https://youtu.be/ra2sVFEPtN8
Learn more on the ChimeraX website:
https://www.rbvi.ucsf.edu/chimerax/data/alphafold-nov2021/af_sbgrid.html
This talk was presented as part of the SBGrid Australasian III Mini-series - CryoEM: from Sample to Structure and should appeal to both novice and expert structural biologists.
See the full mini-series lineup at https://sbgrid.org/news/sbgrid-university-otago-webinar-series.
Topic: VMD: Preparing, Analyzing, and Visualizing Molecular Dynamics Simulations
Presenters: John Stone, University of Illinois Urbana-Champaign and Abhishek Singharoy, Arizona State University
Host: Jason Key
Date Recorded: January 28, 2020
Topic: Physics-Driven Discovery of SNX281, a Novel Small Molecule Sting Agonist in Clinical Trials for Solid Tumors or Lymphoma
Presenter: Woody Sherman, Ph.D., Silicon Therapeutics
Host: Jason Key
Recorded on March 23, 2021
Topic: Crystallographic data processing with XDS, using XDSGUI
Presenter: Kay Diederichs, Professor, Universität Konstanz
Host: Jason Key
Recorded on May 5, 2020
Topic: Automated Data Analysis with xia2
Presenter: Graeme Winter, Scientist, Diamond Light Source, UK
Host: Paul Sanschagrin
Recorded on April 18, 2013
Topic: xMDFF, a new molecular dynamics flexible fitting-based approach.
Presenter: Abhishek Singharoy, Postdoctoral Fellow, Beckman Institute and University of Illinois at Urbana Champaign.
Host: Jason Key
Recorded on December 6, 2016