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Supported Applications

RingMapper

  • Description

    a code for performing RING-MaP and PAIR-MaP analysis.

  • Usage

    To list all executables provided by RingMapper, run: $ sbgrid-list ringmapper Copy to clipboard

  • Usage Notes

    SBGrid curated RingMapper provides the following callable programs: ringmapper.py pairmapper.py arcPlot.py

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install ringmapper Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    A. M. Mustoe, N. N. Lama, P. S. Irving, S. W. Olson, and K. M. Weeks. 2019. RNA base-pairing complexity in living cells visualized by correlated chemical probing. Proceedings of the National Academy of Sciences of the United States of America. 116(49): 24574-24582.


    • *Full citation information available through

  • Keywords

    RNA-Seq Analysis, RNA-Sequencing

  • Default Versions

    Linux 64:  1.2 (1.1 GB)

  • Developers

    Anthony Mustoe, Nicole N. Lama, Kevin M Weeks, Patrick S. Irving, Samuel W. Olson

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