Member Publications
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154 Member Publications for June 2021
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Mass spectrometric based detection of protein nucleotidylation in the RNA polymerase of SARS-CoV-2.
- Commun Chem - published June 30, 2021
- Conti BJ, Leicht AS, Kirchdoerfer RN, Sussman MR
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Automatic Bayesian Weighting for SAXS Data.
- Front Mol Biosci - published June 21, 2021
- Spill YG, Karami Y, Maisonneuve P, Wolff N, Nilges M
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Sequence-Signature Optimization Enables Improved Identification of Human HV6-1-Derived Class Antibodies That Neutralize Diverse Influenza A Viruses.
- Front Immunol - published June 17, 2021
- Chuang GY, Shen CH, Cheung CS, Gorman J, Creanga A, Joyce MG, Leung K, Rawi R, Wang L, Yang ES, Yang Y, Zhang B, Zhang Y, Kanekiyo M, Zhou T, DeKosky BJ, Graham BS, Mascola JR, Kwong PD
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Preface.
- Methods Enzymol - published June 14, 2021
- Minor DL Jr, Colecraft HM
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Editorial: Mechanisms of Fluorescent Proteins.
- Front Mol Biosci - published June 14, 2021
- Fang C, Drobizhev M, Ng HL, Pantazis P
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Structural basis for inhibition of the AAA-ATPase Drg1 by diazaborine.
- Nat Commun - published June 9, 2021
- Prattes M, Grishkovskaya I, Hodirnau VV, Rössler I, Klein I, Hetzmannseder C, Zisser G, Gruber CC, Gruber K, Haselbach D, Bergler H
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A phase 2 trial of inhaled nitrous oxide for treatment-resistant major depression.
- Sci Transl Med - published June 9, 2021
- Nagele P, Palanca BJ, Gott B, Brown F, Barnes L, Nguyen T, Xiong W, Salloum NC, Espejo GD, Lessov-Schlaggar CN, Jain N, Cheng WWL, Komen H, Yee B, Bolzenius JD, Janski A, Gibbons R, Zorumski CF, Conway CR
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Inherited nuclear pore substructures template post-mitotic pore assembly.
- Dev Cell - published June 9, 2021
- Chou YY, Upadhyayula S, Houser J, He K, Skillern W, Scanavachi G, Dang S, Sanyal A, Ohashi KG, Di Caprio G, Kreutzberger AJB, Vadakkan TJ, Kirchhausen T
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Activity-based, bioorthogonal imaging of phospholipase D reveals spatiotemporal dynamics of GPCR-Gq signaling.
- Cell Chem Biol - published June 9, 2021
- Liang D, Cheloha RW, Watanabe T, Gardella TJ, Baskin JM
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Differential immune imprinting by influenza virus vaccination and infection in nonhuman primates.
- Proc Natl Acad Sci U S A - published June 8, 2021
- McCarthy KR, Von Holle TA, Sutherland LL, Oguin TH 3rd, Sempowski GD, Harrison SC, Moody MA
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Interaction hot spots for phase separation revealed by NMR studies of a CAPRIN1 condensed phase.
- Proc Natl Acad Sci U S A - published June 8, 2021
- Kim TH, Payliss BJ, Nosella ML, Lee ITW, Toyama Y, Forman-Kay JD, Kay LE
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Generation of ordered protein assemblies using rigid three-body fusion.
- Proc Natl Acad Sci U S A - published June 8, 2021
- Vulovic I, Yao Q, Park YJ, Courbet A, Norris A, Busch F, Sahasrabuddhe A, Merten H, Sahtoe DD, Ueda G, Fallas JA, Weaver SJ, Hsia Y, Langan RA, Plückthun A, Wysocki VH, Veesler D, Jensen GJ, Baker D
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Purification of a native nicotinic receptor.
- Methods Enzymol - published June 8, 2021
- Rahman MM, Worrell BT, Stowell MHB, Hibbs RE
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Production of K2P2.1 (TREK-1) for structural studies.
- Methods Enzymol - published June 8, 2021
- Lee H, Lolicato M, Arrigoni C, Minor DL Jr
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SARS-CoV-2 3a expression, purification, and reconstitution into lipid nanodiscs.
- Methods Enzymol - published June 8, 2021
- Kern DM, Brohawn SG
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Preface.
- Methods Enzymol - published June 8, 2021
- Minor DL Jr, Colecraft HM
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Structural determination of human Nav1.4 and Nav1.7 using single particle cryo-electron microscopy.
- Methods Enzymol - published June 8, 2021
- Shen H, Yan N, Pan X
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Loss of the Bacterial Flagellar Motor Switch Complex upon Cell Lysis.
- mBio - published June 8, 2021
- Kaplan M, Tocheva EI, Briegel A, Dobro MJ, Chang YW, Subramanian P, McDowall AW, Beeby M, Jensen GJ
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An amphipathic Bax core dimer forms part of the apoptotic pore wall in the mitochondrial membrane.
- EMBO J - published June 8, 2021
- Lv F, Qi F, Zhang Z, Wen M, Kale J, Piai A, Du L, Wang S, Zhou L, Yang Y, Wu B, Liu Z, Del Rosario J, Pogmore J, Chou JJ, Andrews DW, Lin J, OuYang B
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Handling heme with care.
- Nat Chem Biol - published June 8, 2021
- Brown BL, Iverson TM
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An interdomain hydrogen bond in the Rag GTPases maintains stable mTORC1 signaling in sensing amino acids.
- J Biol Chem - published June 8, 2021
- Egri SB, Shen K
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Altered selection on a single self-ligand promotes susceptibility to organ-specific T cell infiltration.
- J Exp Med - published June 7, 2021
- Klawon DEJ, Gilmore DC, Leonard JD, Miller CH, Chao JL, Walker MT, Duncombe RK, Tung KS, Adams EJ, Savage PA
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Nanobodies from camelid mice and llamas neutralize SARS-CoV-2 variants.
- Nature - published June 7, 2021
- Xu J, Xu K, Jung S, Conte A, Lieberman J, Muecksch F, Lorenzi JCC, Park S, Schmidt F, Wang Z, Huang Y, Luo Y, Nair M, Wang P, Schulz JE, Tessarollo L, Bylund T, Chuang GY, Olia AS, Stephens T, Teng IT, Tsybovsky Y, Zhou T, Munster V, Ho DD, Hatziioannou T, Bieniasz PD, Nussenzweig MC, Kwong PD, Casellas R
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Synthesis-temperature-regulated multi-enzyme-mimicking activities of ceria nanozymes.
- J Mater Chem B - published June 7, 2021
- Liu X, Wu J, Liu Q, Lin A, Li S, Zhang Y, Wang Q, Li T, An X, Zhou Z, Yang M, Wei H
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Physical Activity as a Predictor of Cognitive Decline in an Elderly Essential Tremor Cohort: A Prospective, Longitudinal Study.
- Front Neurol - published June 7, 2021
- Radler KH, Chapman S, Zdrodowska MA, Dowd HN, Liu X, Huey ED, Cosentino S, Louis ED
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3D Printed frames to enable reuse and improve the fit of N95 and KN95 respirators.
- BMC Biomed Eng - published June 7, 2021
- McAvoy M, Bui AN, Hansen C, Plana D, Said JT, Yu Z, Yang H, Freake J, Van C, Krikorian D, Cramer A, Smith L, Jiang L, Lee KJ, Li SJ, Beller B, Huggins K, Short MP, Yu SH, Mostaghimi A, Sorger PK, LeBoeuf NR
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KRAS-dependent cancer cells promote survival by producing exosomes enriched in Survivin.
- Cancer Lett - published June 7, 2021
- Chang WH, Thi Nguyen TT, Hsu CH, Bryant KL, Kim HJ, Ying H, Erickson JW, Der CJ, Cerione RA, Antonyak MA
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Molecular Characterization of a Rare Case of Bilateral Vitreoretinal T Cell Lymphoma through Vitreous Liquid Biopsy.
- Int J Mol Sci - published June 5, 2021
- Cani AK, Toral MA, Balikov DA, Betz BL, Hu K, Liu CJ, Prifti MV, Chinnaiyan AM, Tomlins SA, Mahajan VB, Rao RC
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Improving RNA Crystal Diffraction Quality by Postcrystallization Treatment.
- Methods Mol Biol - published June 4, 2021
- Zhang J, Ferré-D'Amaré AR
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miCLIP-MaPseq Identifies Substrates of Radical SAM RNA-Methylating Enzyme Using Mechanistic Cross-Linking and Mismatch Profiling.
- Methods Mol Biol - published June 4, 2021
- Stojković V, Weinberg DE, Fujimori DG
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Structural and genetic convergence of HIV-1 neutralizing antibodies in vaccinated non-human primates.
- PLoS Pathog - published June 4, 2021
- Cai F, Chen WH, Wu W, Jones JA, Choe M, Gohain N, Shen X, LaBranche C, Eaton A, Sutherland L, Lee EM, Hernandez GE, Wu NR, Scearce R, Seaman MS, Moody MA, Santra S, Wiehe K, Tomaras GD, Wagh K, Korber B, Bonsignori M, Montefiori DC, Haynes BF, de Val N, Joyce MG, Saunders KO
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Structural basis of successive adenosine modifications by the conserved ribosomal methyltransferase KsgA.
- Nucleic Acids Res - published June 4, 2021
- Stephan NC, Ries AB, Boehringer D, Ban N
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A Trimeric Hydrophobic Zipper Mediates the Intramembrane Assembly of SARS-CoV-2 Spike.
- J Am Chem Soc - published June 4, 2021
- Fu Q, Chou JJ
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Structure-based functional mechanisms and biotechnology applications of anti-CRISPR proteins.
- Nat Rev Mol Cell Biol - published June 4, 2021
- Jia N, Patel DJ
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Tight nanoscale clustering of Fcγ receptors using DNA origami promotes phagocytosis.
- Elife - published June 3, 2021
- Kern N, Dong R, Douglas S, Vale RD, Morrissey MA
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From the Three-Dimensional Structure of Phosphotriesterase.
- Biochemistry - published June 3, 2021
- Holden HM, Raushel FM
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Structural Characterization of Endogenous Tuberous Sclerosis Protein Complex Revealed Potential Polymeric Assembly.
- Biochemistry - published June 3, 2021
- Dai DL, Hasan SMN, Woollard G, Abbas YM, Bueler SA, Julien JP, Rubinstein JL, Mazhab-Jafari MT
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Nuclear compartmentalization of TERT mRNA and TUG1 lncRNA is driven by intron retention.
- Nat Commun - published June 3, 2021
- Dumbović G, Braunschweig U, Langner HK, Smallegan M, Biayna J, Hass EP, Jastrzebska K, Blencowe B, Cech TR, Caruthers MH, Rinn JL
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The to and fro of Rho.
- Structure - published June 3, 2021
- Westover KD
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SARS-CoV-2 proteins and anti-COVID-19 drugs induce lytic reactivation of an oncogenic virus.
- Commun Biol - published June 3, 2021
- Chen J, Dai L, Barrett L, James J, Plaisance-Bonstaff K, Post SR, Qin Z
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Asymmetric activation of the calcium-sensing receptor homodimer.
- Nature - published June 3, 2021
- Gao Y, Robertson MJ, Rahman SN, Seven AB, Zhang C, Meyerowitz JG, Panova O, Hannan FM, Thakker RV, Bräuner-Osborne H, Mathiesen JM, Skiniotis G
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G-protein activation by a metabotropic glutamate receptor.
- Nature - published June 3, 2021
- Seven AB, Barros-Álvarez X, de Lapeyrière M, Papasergi-Scott MM, Robertson MJ, Zhang C, Nwokonko RM, Gao Y, Meyerowitz JG, Rocher JP, Schelshorn D, Kobilka BK, Mathiesen JM, Skiniotis G
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cAMP binding to closed pacemaker ion channels is non-cooperative.
- Nature - published June 3, 2021
- White DS, Chowdhury S, Idikuda V, Zhang R, Retterer ST, Goldsmith RH, Chanda B
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Insights into VPS13 properties and function reveal a new mechanism of eukaryotic lipid transport.
- Biochim Biophys Acta Mol Cell Biol Lipids - published June 3, 2021
- Leonzino M, Reinisch KM, De Camilli P
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Structural basis for the constitutive activity and immunomodulatory properties of the Epstein-Barr virus-encoded G protein-coupled receptor BILF1.
- Immunity - published June 3, 2021
- Tsutsumi N, Qu Q, Mavri M, Baggesen MS, Maeda S, Waghray D, Berg C, Kobilka BK, Rosenkilde MM, Skiniotis G, Garcia KC
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Structural Insights Accelerate the Discovery of Opioid Alternatives.
- Annu Rev Biochem - published June 2, 2021
- Che T, Roth BL
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"Just in Time": The Role of Cryo-Electron Microscopy in Combating Recent Pandemics.
- Biochemistry - published June 2, 2021
- Frank J
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Characterization of an aminotransferase from Acanthamoeba polyphaga Mimivirus.
- Protein Sci - published June 2, 2021
- Seltzner CA, Ferek JD, Thoden JB, Holden HM
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The nonreceptor tyrosine kinase SRMS inhibits autophagy and promotes tumor growth by phosphorylating the scaffolding protein FKBP51.
- PLoS Biol - published June 2, 2021
- Park JM, Yang SW, Zhuang W, Bera AK, Liu Y, Gurbani D, von Hoyningen-Huene SJ, Sakurada SM, Gan H, Pruett-Miller SM, Westover KD, Potts MB
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Large Clostridial Toxins: Mechanisms and Roles in Disease.
- Microbiol Mol Biol Rev - published June 2, 2021
- Orrell KE, Melnyk RA
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Repression by the Arabidopsis TOPLESS corepressor requires association with the core Mediator complex.
- Elife - published June 2, 2021
- Leydon AR, Wang W, Gala HP, Gilmour S, Juarez-Solis S, Zahler ML, Zemke JE, Zheng N, Nemhauser JL
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Identification and validation of selective deubiquitinase inhibitors.
- Cell Chem Biol - published June 2, 2021
- Varca AC, Casalena D, Chan WC, Hu B, Magin RS, Roberts RM, Liu X, Zhu H, Seo HS, Dhe-Paganon S, Marto JA, Auld D, Buhrlage SJ
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Key computational findings reveal proton transfer as driving the functional cycle in the phosphate transporter PiPT.
- Proc Natl Acad Sci U S A - published June 2, 2021
- Liu Y, Li C, Gupta M, Verma N, Johri AK, Stroud RM, Voth GA
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In vivo monoclonal antibody efficacy against SARS-CoV-2 variant strains.
- Nature - published June 2, 2021
- Chen RE, Winkler ES, Case JB, Aziati ID, Bricker TL, Joshi A, Darling TL, Ying B, Errico JM, Shrihari S, VanBlargan LA, Xie X, Gilchuk P, Zost SJ, Droit L, Liu Z, Stumpf S, Wang D, Handley SA, Stine WB Jr, Shi PY, Davis-Gardner ME, Suthar MS, Knight MG, Andino R, Chiu CY, Ellebedy AH, Fremont DH, Whelan SPJ, Crowe JE Jr, Purcell L, Corti D, Boon ACM, Diamond MS
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An Overview of Microcrystal Electron Diffraction (MicroED).
- Annu Rev Biochem - published June 2, 2021
- Mu X, Gillman C, Nguyen C, Gonen T
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A Fragment-Based Approach to Discovery of RAGE Inhibitors.
- Proteins - published June 2, 2021
- Kozlyuk N, Gilston BA, Salay LE, Gogliotti RD, Christov PP, Kim K, Ovee M, Waterson AG, Chazin WJ
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Canonical features of human antibodies recognizing the influenza hemagglutinin trimer interface.
- J Clin Invest - published June 2, 2021
- Zost SJ, Dong J, Gilchuk IM, Gilchuk P, Thornburg NJ, Bangaru S, Kose N, Finn JA, Bombardi R, Soto C, Chen EC, Nargi RS, Sutton RE, Irving RP, Suryadevara N, Westover JB, Carnahan RH, Turner HL, Li S, Ward AB, Crowe JE Jr
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Apoptosis-inducing anti-HER2 agents operate through oligomerization-induced receptor immobilization.
- Commun Biol - published June 2, 2021
- Stüber JC, Richter CP, Bellón JS, Schwill M, König I, Schuler B, Piehler J, Plückthun A
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Dph3 Enables Aerobic Diphthamide Biosynthesis by Donating One Iron Atom to Transform a [3Fe-4S] to a [4Fe-4S] Cluster in Dph1-Dph2.
- J Am Chem Soc - published June 2, 2021
- Zhang Y, Su D, Dzikovski B, Majer SH, Coleman R, Chandrasekaran S, Fenwick MK, Crane BR, Lancaster KM, Freed JH, Lin H
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Cleavage and Polyadenylation Specificity Factor 6 Is Required for Efficient HIV-1 Latency Reversal.
- mBio - published June 2, 2021
- Zheng Y, Schubert HL, Singh PK, Martins LJ, Engelman AN, D'Orso I, Hill CP, Planelles V
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Elucidation of the molecular interactions that enable stable assembly and structural diversity in multicomponent immune receptors.
- Proc Natl Acad Sci U S A - published June 2, 2021
- Fong LK, Chalkley MJ, Tan SK, Grabe M, DeGrado WF
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Correction to 'Secondary structure determination of conserved SARS-CoV-2 RNA elements by NMR spectroscopy'.
- Nucleic Acids Res - published June 2, 2021
- Wacker A, Weigand JE, Akabayov SR, Altincekic N, Bains JK, Banijamali E, Binas O, Castillo-Martinez J, Cetiner E, Ceylan B, Chiu LY, Davila-Calderon J, Dhamotharan K, Duchardt-Ferner E, Ferner J, Frydman L, Fürtig B, Gallego J, Grün JT, Hacker C, Haddad C, Hähnke M, Hengesbach M, Hiller F, Hohmann KF, Hymon D, de Jesus V, Jonker H, Keller H, Knezic B, Landgraf T, Löhr F, Luo L, Mertinkus KR, Muhs C, Novakovic M, Oxenfarth A, Palomino-Schätzlein M, Petzold K, Peter SA, Pyper DJ, Qureshi NS, Riad M, Richter C, Saxena K, Schamber T, Scherf T, Schlagnitweit J, Schlundt A, Schnieders R, Schwalbe H, Simba-Lahuasi A, Sreeramulu S, Stirnal E, Sudakov A, Tants JN, Tolbert BS, Vögele J, Weiß L, Wirmer-Bartoschek J, Wirtz Martin MA, Wöhnert J, Zetzsche H
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Cryo-EM structure of SARS-CoV-2 ORF3a in lipid nanodiscs.
- Nat Struct Mol Biol - published June 2, 2021
- Kern DM, Sorum B, Mali SS, Hoel CM, Sridharan S, Remis JP, Toso DB, Kotecha A, Bautista DM, Brohawn SG
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Single-molecule binding characterization of primosomal protein PriA involved in replication restart.
- Phys Chem Chem Phys - published June 2, 2021
- Lee TY, Li YC, Lin MG, Hsiao CD, Li HW
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Direct activation of the proton channel by albumin leads to human sperm capacitation and sustained release of inflammatory mediators by neutrophils.
- Nat Commun - published June 2, 2021
- Zhao R, Dai H, Arias RJ, De Blas GA, Orta G, Pavarotti MA, Shen R, Perozo E, Mayorga LS, Darszon A, Goldstein SAN
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Exploring the druggability of conserved RNA regulatory elements in the SARS-CoV-2 genome.
- Angew Chem Int Ed Engl - published June 2, 2021
- Sreeramulu S, Richter C, Berg H, Wirtz Martin MA, Ceylan B, Matzel T, Adam J, Altincekic N, Azzaoui K, Bains JK, Blommers MJJ, Ferner J, Fürtig B, Göbel M, Grün JT, Hengesbach M, Hohmann KF, Hymon D, Knezic B, Martins J, Mertinkus KR, Niesteruk A, Peter SA, Pyper DJ, Qureshi NS, Scheffer U, Schlundt A, Schnieders R, Stirnal E, Sudakov A, Tröster A, Vögele J, Wacker A, Weigand JE, Wirmer-Bartoschek J, Wöhnert J, Schwalbe H
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Structure-guided design of a perampanel-derived pharmacophore targeting the SARS-CoV-2 main protease.
- Structure - published June 2, 2021
- Deshmukh MG, Ippolito JA, Zhang CH, Stone EA, Reilly RA, Miller SJ, Jorgensen WL, Anderson KS
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Rapid, reliable, and reproducible cell fusion assay to quantify SARS-Cov-2 spike interaction with hACE2.
- PLoS Pathog - published June 2, 2021
- Zhao M, Su PY, Castro DA, Tripler TN, Hu Y, Cook M, Ko AI, Farhadian SF, Israelow B, Dela Cruz CS, Xiong Y, Sutton RE, Yale IMPACT Research Team.
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Dimerization of Cadherin-11 involves multi-site coupled unfolding and strand swapping.
- Structure - published June 2, 2021
- Koss H, Honig B, Shapiro L, Palmer AG 3rd
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Calcium signals regulate the functional differentiation of thymic iNKT cells.
- EMBO J - published June 2, 2021
- Zhao M, Quintana A, Zhang C, Andreyev AY, Kiosses W, Kuwana T, Murphy A, Hogan PG, Kronenberg M
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Structural basis for enhanced infectivity and immune evasion of SARS-CoV-2 variants.
- Science - published June 2, 2021
- Cai Y, Zhang J, Xiao T, Lavine CL, Rawson S, Peng H, Zhu H, Anand K, Tong P, Gautam A, Lu S, Sterling SM, Walsh RM Jr, Rits-Volloch S, Lu J, Wesemann DR, Yang W, Seaman MS, Chen B
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Structural basis of substrate specificity in human cytidine deaminase family APOBEC3s.
- J Biol Chem - published June 2, 2021
- Hou S, Lee JM, Myint W, Matsuo H, Yilmaz NK, Schiffer CA
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Combined EZH2 inhibition and Ikaros degradation leads to enhanced anti-tumor activity in diffuse large B-cell lymphoma.
- Clin Cancer Res - published June 2, 2021
- Tong KI, Yoon S, Isaev K, Bakhtiari M, Lackraj T, He MY, Joynt J, Silva A, Xu MC, Prive GG, He HH, Tiedemann RE, Chavez EA, Chong LC, Boyle M, Scott DW, Steidl C, Kridel R
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Comprehensive Assessment of The Relationship Between Site-2 Specificity and Helix α2 in the Erbin PDZ Domain.
- J Mol Biol - published June 2, 2021
- Teyra J, McLaughlin M, Singer A, Kelil A, Ernst A, Sicheri F, Sidhu SS
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Rapid generation of potent antibodies by autonomous hypermutation in yeast.
- Nat Chem Biol - published June 2, 2021
- Wellner A, McMahon C, Gilman MSA, Clements JR, Clark S, Nguyen KM, Ho MH, Hu VJ, Shin JE, Feldman J, Hauser BM, Caradonna TM, Wingler LM, Schmidt AG, Marks DS, Abraham J, Kruse AC, Liu CC
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Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity.
- Science - published June 2, 2021
- Gobeil SM, Janowska K, McDowell S, Mansouri K, Parks R, Stalls V, Kopp MF, Manne K, Li D, Wiehe K, Saunders KO, Edwards RJ, Korber B, Haynes BF, Henderson R, Acharya P
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Roles of constitutive and signal-dependent protein phosphatase 2A docking motifs in burst-attenuation of the cyclic AMP response element binding protein.
- J Biol Chem - published June 2, 2021
- Kim SH, Wu CG, Jia W, Xing Y, Tibbetts RS
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Co-occurring gain-of-function mutations in HER2 and HER3 modulate HER2/HER3 activation, oncogenesis, and HER2 inhibitor sensitivity.
- Cancer Cell - published June 2, 2021
- Hanker AB, Brown BP, Meiler J, Marín A, Jayanthan HS, Ye D, Lin CC, Akamatsu H, Lee KM, Chatterjee S, Sudhan DR, Servetto A, Brewer MR, Koch JP, Sheehan JH, He J, Lalani AS, Arteaga CL
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Structure and transport mechanism of P5B-ATPases.
- Nat Commun - published June 2, 2021
- Li P, Wang K, Salustros N, Grønberg C, Gourdon P
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RosettaCM for antibodies with very long HCDR3s and low template availability.
- Proteins - published June 2, 2021
- Kodali P, Schoeder CT, Schmitz S, Crowe JE Jr, Meiler J
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Direct interaction of DNA repair protein tyrosyl DNA phosphodiesterase 1 and the DNA ligase III catalytic domain is regulated by phosphorylation of its flexible N-terminus.
- J Biol Chem - published June 2, 2021
- Rashid I, Hammel M, Sverzhinsky A, Tsai MS, Pascal JM, Tainer JA, Tomkinson AE
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Mechanism of molybdate insertion into pterin-based molybdenum cofactors.
- Nat Chem - published June 2, 2021
- Probst C, Yang J, Krausze J, Hercher TW, Richers CP, Spatzal T, Kc K, Giles LJ, Rees DC, Mendel RR, Kirk ML, Kruse T
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Identification of an atypical interaction site in the BTB domain of the MYC-interacting zinc-finger protein 1.
- Structure - published June 2, 2021
- Orth B, Sander B, Möglich A, Diederichs K, Eilers M, Lorenz S
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FRQ-CK1 Interaction Underlies Temperature Compensation of the Neurospora Circadian Clock.
- mBio - published June 2, 2021
- Hu Y, Liu X, Lu Q, Yang Y, He Q, Liu Y, Liu X
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LAMP-Seq enables sensitive, multiplexed COVID-19 diagnostics using molecular barcoding.
- Nat Biotechnol - published June 2, 2021
- Ludwig KU, Schmithausen RM, Li D, Jacobs ML, Hollstein R, Blumenstock K, Liebing J, Słabicki M, Ben-Shmuel A, Israeli O, Weiss S, Ebert TS, Paran N, Rüdiger W, Wilbring G, Feldman D, Lippke B, Ishorst N, Hochfeld LM, Beins EC, Kaltheuner IH, Schmitz M, Wöhler A, Döhla M, Sib E, Jentzsch M, Borrajo JD, Strecker J, Reinhardt J, Cleary B, Geyer M, Hölzel M, Macrae R, Nöthen MM, Hoffmann P, Exner M, Regev A, Zhang F, Schmid-Burgk JL
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EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart.
- Mol Cell - published June 2, 2021
- Hambarde S, Tsai CL, Pandita RK, Bacolla A, Maitra A, Charaka V, Hunt CR, Kumar R, Limbo O, Le Meur R, Chazin WJ, Tsutakawa SE, Russell P, Schlacher K, Pandita TK, Tainer JA
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Systematic analysis of SARS-CoV-2 infection of an ACE2-negative human airway cell.
- Cell Rep - published June 2, 2021
- Puray-Chavez M, LaPak KM, Schrank TP, Elliott JL, Bhatt DP, Agajanian MJ, Jasuja R, Lawson DQ, Davis K, Rothlauf PW, Liu Z, Jo H, Lee N, Tenneti K, Eschbach JE, Shema Mugisha C, Cousins EM, Cloer EW, Vuong HR, VanBlargan LA, Bailey AL, Gilchuk P, Crowe JE Jr, Diamond MS, Hayes DN, Whelan SPJ, Horani A, Brody SL, Goldfarb D, Major MB, Kutluay SB
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Construction of a Three-Color Prism-Based TIRF Microscope to Study the Interactions and Dynamics of Macromolecules.
- Biology (Basel) - published June 2, 2021
- Fairlamb MS, Whitaker AM, Bain FE, Spies M, Freudenthal BD
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Screening strategies for identifying RNA- and ribonucleoprotein-targeted compounds.
- Trends Pharmacol Sci - published June 2, 2021
- Martin WJ, Grandi P, Marcia M
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NNT mediates redox-dependent pigmentation via a UVB- and MITF-independent mechanism.
- Cell - published June 2, 2021
- Allouche J, Rachmin I, Adhikari K, Pardo LM, Lee JH, McConnell AM, Kato S, Fan S, Kawakami A, Suita Y, Wakamatsu K, Igras V, Zhang J, Navarro PP, Lugo CM, Noonan HR, Christie KA, Itin K, Mujahid N, Lo JA, Won CH, Evans CL, Weng QY, Wang H, Osseiran S, Lovas A, Németh I, Cozzio A, Navarini AA, Hsiao JJ, Nguyen N, Kemény LV, Iliopoulos O, Berking C, Ruzicka T, Gonzalez-José R, Bortolini MC, Canizales-Quinteros S, Acuna-Alonso V, Gallo C, Poletti G, Bedoya G, Rothhammer F, Ito S, Schiaffino MV, Chao LH, Kleinstiver BP, Tishkoff S, Zon LI, Nijsten T, Ruiz-Linares A, Fisher DE, Roider E
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Molecular dynamics study of water channels in natural and synthetic amyloid-β fibrils.
- J Chem Phys - published June 2, 2021
- Natesh SR, Hummels AR, Sachleben JR, Sosnick TR, Freed KF, Douglas JF, Meredith SC, Haddadian EJ
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A single intranasal or intramuscular immunization with chimpanzee adenovirus-vectored SARS-CoV-2 vaccine protects against pneumonia in hamsters.
- Cell Rep - published June 2, 2021
- Bricker TL, Darling TL, Hassan AO, Harastani HH, Soung A, Jiang X, Dai YN, Zhao H, Adams LJ, Holtzman MJ, Bailey AL, Case JB, Fremont DH, Klein R, Diamond MS, Boon ACM
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CD209L/L-SIGN and CD209/DC-SIGN act as receptors for SARS-CoV-2.
- bioRxiv - published June 1, 2021
- Amraei R, Yin W, Napoleon MA, Suder EL, Berrigan J, Zhao Q, Olejnik J, Chandler KB, Xia C, Feldman J, Hauser BM, Caradonna TM, Schmidt AG, Gummuluru S, Muhlberger E, Chitalia V, Costello CE, Rahimi N
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Early Returns on Small Molecule Therapeutics for SARS-CoV-2.
- ACS Infect Dis - published June 1, 2021
- Namchuk MN
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Cytosolic protein quality control machinery: Interactions of Hsp70 with a network of co-chaperones and substrates.
- Exp Biol Med (Maywood) - published June 1, 2021
- Karunanayake C, Page RC
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AAV-S: A versatile capsid variant for transduction of mouse and primate inner ear.
- Mol Ther Methods Clin Dev - published June 1, 2021
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The basis of a more contagious 501Y.V1 variant of SARS-CoV-2.
- Cell Res - published June 1, 2021
- Liu H, Zhang Q, Wei P, Chen Z, Aviszus K, Yang J, Downing W, Jiang C, Liang B, Reynoso L, Downey GP, Frankel SK, Kappler J, Marrack P, Zhang G
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Spectroscopic and biochemical characterization of metallo-β-lactamase IMP-1 with dicarboxylic, sulfonyl, and thiol inhibitors.
- Bioorg Med Chem - published June 1, 2021
- Zhang H, Yang K, Cheng Z, Thomas C, Steinbrunner A, Pryor C, Vulcan M, Kemp C, Orea D, Paththamperuma C, Chen AY, Cohen SM, Page RC, Tierney DL, Crowder MW
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The chemistry and biology of phosphatidylinositol 4-phosphate at the plasma membrane.
- Bioorg Med Chem - published June 1, 2021
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Getting swept off your toe(hold)s: Single-molecule DNA fission analysis offers glimpse into kinetics of branch migration.
- Biophys J - published June 1, 2021
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SIGLEC-3 (CD33) serves as an immune checkpoint receptor for HBV infection.
- J Clin Invest - published June 1, 2021
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The evolution of interdependence in a four-way mealybug symbiosis.
- Genome Biol Evol - published June 1, 2021
- Garber AI, Kupper M, Laetsch DR, Weldon SR, Ladinsky MS, Bjorkman PJ, McCutcheon JP
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A Prevalent Focused Human Antibody Response to the Influenza Virus Hemagglutinin Head Interface.
- mBio - published June 1, 2021
- McCarthy KR, Lee J, Watanabe A, Kuraoka M, Robinson-McCarthy LR, Georgiou G, Kelsoe G, Harrison SC
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Molecular basis of CD-NTase nucleotide selection in CBASS anti-phage defense.
- Cell Rep - published June 1, 2021
- Govande AA, Duncan-Lowey B, Eaglesham JB, Whiteley AT, Kranzusch PJ
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Crystal Structure of the [4Fe-4S] Cluster-Containing Adenosine-5'-phosphosulfate Reductase from Mycobacterium tuberculosis.
- ACS Omega - published June 1, 2021
- Feliciano PR, Carroll KS, Drennan CL
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Characterization of SARS-CoV-2 N protein reveals multiple functional consequences of the C-terminal domain.
- iScience - published June 1, 2021
- Wu C, Qavi AJ, Hachim A, Kavian N, Cole AR, Moyle AB, Wagner ND, Sweeney-Gibbons J, Rohrs HW, Gross ML, Peiris JSM, Basler CF, Farnsworth CW, Valkenburg SA, Amarasinghe GK, Leung DW
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Chaperone-mediated autophagy: a gatekeeper of neuronal proteostasis.
- Autophagy - published June 1, 2021
- Bourdenx M, Gavathiotis E, Cuervo AM
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Structural basis for accommodation of emerging B.1.351 and B.1.1.7 variants by two potent SARS-CoV-2 neutralizing antibodies.
- Structure - published June 1, 2021
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Report of the National Institutes of Health SARS-CoV-2 Antiviral Therapeutics Summit.
- J Infect Dis - published June 1, 2021
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Substrate and product complexes reveal mechanisms of Hedgehog acylation by HHAT.
- Science - published June 1, 2021
- Jiang Y, Benz TL, Long SB
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Transcriptomics-based drug repositioning pipeline identifies therapeutic candidates for COVID-19.
- Sci Rep - published June 1, 2021
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Evolution of a virus-like architecture and packaging mechanism in a repurposed bacterial protein.
- Science - published June 1, 2021
- Tetter S, Terasaka N, Steinauer A, Bingham RJ, Clark S, Scott AJP, Patel N, Leibundgut M, Wroblewski E, Ban N, Stockley PG, Twarock R, Hilvert D
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Random access DNA memory using Boolean search in an archival file storage system.
- Nat Mater - published June 1, 2021
- Banal JL, Shepherd TR, Berleant J, Huang H, Reyes M, Ackerman CM, Blainey PC, Bathe M
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Antigen-Presenting, Self-Assembled Protein Nanobarrels as an Adjuvant-Free Vaccine Platform against Influenza Virus.
- ACS Nano - published June 1, 2021
- Kang S, Kim Y, Shin Y, Song JJ, Jon S
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Locating Macromolecular Assemblies in Cells by 2D Template Matching with cisTEM.
- Elife - published June 1, 2021
- Lucas BA, Himes BA, Xue L, Grant T, Mahamid J, Grigorieff N
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Structural basis of coronavirus E protein interactions with human PALS1 PDZ domain.
- Commun Biol - published June 1, 2021
- Javorsky A, Humbert PO, Kvansakul M
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Complement Receptor 3 Forms a Compact High-Affinity Complex with iC3b.
- J Immunol - published June 1, 2021
- Jensen RK, Bajic G, Sen M, Springer TA, Vorup-Jensen T, Andersen GR
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Inroads into membrane physiology through transport nanomachines.
- J Mol Biol - published June 1, 2021
- Stockbridge RB, Gaudet R, Grabe M, Minor DL Jr
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Ion channels: Intersection of Structure, Function, and Pharmacology.
- J Mol Biol - published June 1, 2021
- Moiseenkova-Bell V, Delemotte L, Minor DL Jr
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Screening a Library of FDA-Approved and Bioactive Compounds for Antiviral Activity against SARS-CoV-2.
- ACS Infect Dis - published June 1, 2021
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Finding the Ion in the RNA-Stack: Can Computational Models Accurately Predict Key Functional Elements in Large Macromolecular Complexes?
- J Chem Inf Model - published June 1, 2021
- Marcia M, Manigrasso J, De Vivo M
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Methodology for rigorous modeling of protein conformational changes by Rosetta using DEER distance restraints.
- PLoS Comput Biol - published June 1, 2021
- Del Alamo D, Jagessar KL, Meiler J, Mchaourab HS
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The hammerhead self-cleaving motif as a precursor to complex endonucleolytic ribozymes.
- RNA - published June 1, 2021
- DasGupta S, Nykiel K, Piccirilli JA
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The HCK/BTK inhibitor KIN-8194 is active in MYD88 driven lymphomas and overcomes mutated BTKCys481 ibrutinib resistance.
- Blood - published June 1, 2021
- Yang G, Wang J, Tan L, Munshi M, Liu X, Kofides A, Chen JG, Tsakmaklis N, Demos M, Guerrera ML, Xu L, Hunter ZR, Che J, Patterson CJ, Meid KE, Castillo J, Munshi NC, Anderson KC, Cameron M, Buhrlage S, Gray NSS, Treon SPP
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Selective Imaging of Lung Macrophages Using [11C]PBR28-Based Positron Emission Tomography.
- Mol Imaging Biol - published June 1, 2021
- Chen DL, Agapov E, Wu K, Engle JT, Solingapuram Sai KK, Arentson E, Spayd KJ, Moreland KT, Toth K, Byers DE, Pierce RA, Atkinson JJ, Laforest R, Gelman AE, Holtzman MJ
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Structural interactions define assembly adapter function of a type II secretion system pseudopilin.
- Structure - published June 1, 2021
- Escobar CA, Douzi B, Ball G, Barbat B, Alphonse S, Quinton L, Voulhoux R, Forest KT
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Scap structures highlight key role for rotation of intertwined luminal loops in cholesterol sensing.
- Cell - published June 1, 2021
- Kober DL, Radhakrishnan A, Goldstein JL, Brown MS, Clark LD, Bai XC, Rosenbaum DM
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Deciphering Antifungal Drug Resistance in Pneumocystis jirovecii DHFR with Molecular Dynamics and Machine Learning.
- J Chem Inf Model - published June 1, 2021
- Leidner F, Kurt Yilmaz N, Schiffer CA
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Stepwise maturation of the peptidyl transferase region of human mitoribosomes.
- Nat Commun - published June 1, 2021
- Lenarčič T, Jaskolowski M, Leibundgut M, Scaiola A, Schönhut T, Saurer M, Lee RG, Rackham O, Filipovska A, Ban N
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Multivalency transforms SARS-CoV-2 antibodies into ultrapotent neutralizers.
- Nat Commun - published June 1, 2021
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Information-driven modeling of biomolecular complexes.
- Curr Opin Struct Biol - published June 1, 2021
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Mapping electromechanical coupling pathways in voltage-gated ion channels: Challenges and the way forward.
- J Mol Biol - published June 1, 2021
- Cowgill J, Chanda B
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Pharmacological Advantage of SIRT2-Selective versus pan-SIRT1-3 Inhibitors.
- ACS Chem Biol - published June 1, 2021
- Hong JY, Fernandez I, Anmangandla A, Lu X, Bai JJ, Lin H
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SD-91 as A Potent and Selective STAT3 Degrader Capable of Achieving Complete and Long-Lasting Tumor Regression.
- ACS Med Chem Lett - published June 1, 2021
- Zhou H, Bai L, Xu R, McEachern D, Chinnaswamy K, Li R, Wen B, Wang M, Yang CY, Meagher JL, Sun D, Stuckey JA, Wang S
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Platelet-derived growth factor receptor beta activates Abl2 via direct binding and phosphorylation.
- J Biol Chem - published June 1, 2021
- Wu K, Wu H, Lyu W, Kim Y, Furdui CM, Anderson KS, Koleske AJ
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The linear ubiquitin chain assembly complex LUBAC generates heterotypic ubiquitin chains.
- Elife - published June 1, 2021
- Rodriguez Carvajal A, Grishkovskaya I, Gomez Diaz C, Vogel A, Sonn-Segev A, Kushwah MS, Schodl K, Deszcz L, Orban-Nemeth Z, Sakamoto S, Mechtler K, Kukura P, Clausen T, Haselbach D, Ikeda F
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Molecular basis of mRNA transport by a kinesin-1-atypical tropomyosin complex.
- Genes Dev - published June 1, 2021
- Dimitrova-Paternoga L, Jagtap PKA, Cyrklaff A, Vaishali, Lapouge K, Sehr P, Perez K, Heber S, Löw C, Hennig J, Ephrussi A
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Divergent evolution toward sex chromosome-specific gene regulation in Drosophila.
- Genes Dev - published June 1, 2021
- Villa R, Jagtap PKA, Thomae AW, Campos Sparr A, Forné I, Hennig J, Straub T, Becker PB
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Designed Ankyrin Repeat Proteins as Novel Binders for Ultrasound Molecular Imaging.
- Ultrasound Med Biol - published June 1, 2021
- Kosareva A, Punjabi M, Ochoa-Espinosa A, Xu L, Schaefer JV, Dreier B, Plückthun A, Kaufmann BA
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Engineering an anti-HER2 biparatopic antibody with a multimodal mechanism of action.
- Nat Commun - published June 1, 2021
- Kast F, Schwill M, Stüber JC, Pfundstein S, Nagy-Davidescu G, Rodríguez JMM, Seehusen F, Richter CP, Honegger A, Hartmann KP, Weber TG, Kroener F, Ernst P, Piehler J, Plückthun A
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Inherited duplications of PPP2R3B predispose to nevi and melanoma via a C21orf91-driven proliferative phenotype.
- Genet Med - published June 1, 2021
- Polubothu S, Zecchin D, Al-Olabi L, Lionarons DA, Harland M, Horswell S, Thomas AC, Hunt L, Wlodarchak N, Aguilera P, Brand S, Bryant D, Carrera C, Chen H, Elgar G, Harwood CA, Howell M, Larue L, Loughlin S, MacDonald J, Malvehy J, Barberan SM, da Silva VM, Molina M, Morrogh D, Moulding D, Nsengimana J, Pittman A, Puig-Butillé JA, Parmar K, Sebire NJ, Scherer S, Stadnik P, Stanier P, Tell G, Waelchli R, Zarrei M, Puig S, Bataille V, Xing Y, Healy E, Moore GE, Di WL, Newton-Bishop J, Downward J, Kinsler VA
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The effect of surgery on radiation necrosis in irradiated brain metastases: extent of resection and long-term clinical and radiographic outcomes.
- J Neurooncol - published June 1, 2021
- Newman WC, Goldberg J, Guadix SW, Brown S, Reiner AS, Panageas K, Beal K, Brennan CW, Tabar V, Young RJ, Moss NS
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Hakai is required for stabilization of core components of the m6A mRNA methylation machinery.
- Nat Commun - published June 1, 2021
- Bawankar P, Lence T, Paolantoni C, Haussmann IU, Kazlauskiene M, Jacob D, Heidelberger JB, Richter FM, Nallasivan MP, Morin V, Kreim N, Beli P, Helm M, Jinek M, Soller M, Roignant JY
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Structural basis for the ARF GAP activity and specificity of the C9orf72 complex.
- Nat Commun - published June 1, 2021
- Su MY, Fromm SA, Remis J, Toso DB, Hurley JH
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Molecular determinants for α-tubulin methylation by SETD2.
- J Biol Chem - published June 1, 2021
- Kearns S, Mason FM, Rathmell WK, Park IY, Walker C, Verhey KJ, Cianfrocco MA
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Rapid assessment of DCLK1 inhibitors using a peptide substrate mobility shift assay.
- STAR Protoc - published June 1, 2021
- Liu Y, Westover KD
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PspA adopts an ESCRT-III-like fold and remodels bacterial membranes.
- Cell - published June 1, 2021
- Junglas B, Huber ST, Heidler T, Schlösser L, Mann D, Hennig R, Clarke M, Hellmann N, Schneider D, Sachse C
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Structural basis of transcriptional activation by the Mycobacterium tuberculosis intrinsic antibiotic-resistance transcription factor WhiB7.
- Mol Cell - published June 1, 2021
- Lilic M, Darst SA, Campbell EA
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A first-in-class Polymerase Theta Inhibitor selectively targets Homologous-Recombination-Deficient Tumors.
- Nat Cancer - published June 1, 2021
- Zhou J, Gelot C, Pantelidou C, Li A, Yücel H, Davis RE, Farkkila A, Kochupurakkal B, Syed A, Shapiro GI, Tainer JA, Blagg BSJ, Ceccaldi R, D'Andrea AD
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Exploiting DNA Endonucleases to Advance Mechanisms of DNA Repair.
- Biology (Basel) - published June 1, 2021
- Thompson MK, Sobol RW, Prakash A
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Structure vs. Function of TRIB1-Myeloid Neoplasms and Beyond.
- Cancers (Basel) - published June 1, 2021
- McMillan HD, Keeshan K, Dunbier AK, Mace PD
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Structures of HIV-1 Neutralizing Antibody 10E8 Delineate the Mechanistic Basis of Its Multi-Peak Behavior on Size-Exclusion Chromatography.
- Antibodies (Basel) - published June 1, 2021
- Do Kwon Y, Wang XE, Bender MF, Yang R, Li Y, McKee K, Rawi R, O'Dell S, Schneck NA, Shaddeau A, Zhang B, Arnold FJ, Connors M, Doria-Rose NA, Kwong PD, Lei QP
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In vitro and in vivo functions of SARS-CoV-2 infection-enhancing and neutralizing antibodies.
- Cell - published June 1, 2021
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Mechanisms of allosteric and mixed mode aromatase inhibitors.
- RSC Chem Biol - published June 1, 2021
- Souza SA, Held A, Lu WJ, Drouhard B, Avila B, Leyva-Montes R, Hu M, Miller BR, Ng HL