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Supported Applications

YUP

  • Description

    (Yammp Under Python) a molecular modeling program designed as a general purpose tool, although development is currently concentrated on molecular simulations (mechanics) and on reduced representation and multiscale modeling. YUP is based on an earlier program Yammp. Also known as Yammp 2.

  • Usage

    To list all executables provided by YUP, run: $ sbgrid-list yup Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install yup Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    R. K. Tan, A. S. Petrov, and S. C. Harvey. 2006. YUP: A Molecular Simulation Program for Coarse-Grained and Multiscaled Models. J Chem Theory Comput. 2(3): 529-540.


    • *Full citation information available through

  • Keywords

    Computational Chemistry

  • Default Versions

    Linux 64:  1.080827 (78.4 KB)
    OS X INTEL:  1.080827 (150.9 KB)

  • Developers

    YUP Developer Group, Steve Harvey

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