Supported Applications


  • Description

    (Yammp Under Python) a molecular modeling program designed as a general purpose tool, although development is currently concentrated on molecular simulations (mechanics) and on reduced representation and multiscale modeling. YUP is based on an earlier program Yammp. Also known as Yammp 2.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid install yup Copy to clipboard
  • Primary Citation*

    R. K. Tan, A. S. Petrov, and S. C. Harvey. 2006. YUP: A Molecular Simulation Program for Coarse-Grained and Multiscaled Models. J Chem Theory Comput. 2(3): 529-540.

    • *Full citation information available through