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Supported Applications

STAMP

  • Description

    (STructural Alignment of Multiple Proteins) a suite of programs to compare and align protein 3-D structures. It will multiply align structures and produce a corresponding sequence alignment with confidence values associated with each aligned position. It will also search a database of protein structures to identify structurally similar proteins and includes a number of utility programs for the manipulation of protein structures.

  • Usage

    To list all executables provided by STAMP, run: $ sbgrid-list stamp Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install stamp Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    R. Russell and G. Barton. 1992. Multiple protein sequence alignment from tertiary structure comparison. Proteins. 14(2): 309-323.

    R. B. Russell. 2010. STAMP: Structural Alignment of Multiple Proteins, Version 4.4 User Guide. Laboratory of Molecular Biophysics, University of Oxford.


    • *Full citation information available through

  • Citation Note

    When using STAMP, please cite both Primary Citations.

  • Keywords

    Analysis

  • Default Versions

    Linux 64:  4.4.2 (21.0 MB)
    OS X INTEL:  4.4.2 (21.0 MB)

  • Other Versions

      Linux 64:

      4.4 (30.7 MB)

    • OS X INTEL:

      4.2 (7.8 MB) , 4.4 (21.4 MB)

  • Developers

    Geoff Barton

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