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ShapeMapper2

  • Description

    a completely rewritten version of our ShapeMapper for reading out the results of an RNA chemical probing experiment by massively parallel sequencing that integrates careful handling of all classes of adduct-induced sequence changes, sequence variant correction, basecall quality filters, and quality-control warnings to identify RNA adduct sites.

  • Usage

    To list all executables provided by ShapeMapper2, run: $ sbgrid-list shapemapper2 Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install shapemapper2 Copy to clipboard Available operating systems: Linux 64

  • Keywords

    Other

  • Default Versions

    Linux 64:  2.2 (2.6 GB)

  • Other Versions

      Linux 64:

      2.1.3 (1.2 GB)

  • Developers

    Kevin M Weeks, Steven Busan

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