Supported Applications

SAM

Description

(Sequence Alignment and Modeling system) a collection of tools for creating, refining, and using linear hidden Markov models for biological sequence analysis.
Installation
Use the following command to install this title with the CLI client: $ sbgrid-cli install sam
Primary Citation*

R. Hughey and A. Krogh. 1996. Hidden Markov models for sequence analysis: extension and analysis of the basic method. Comput Appl Biosci. 12(2): 95-107.
- *Full citation information available through

Keywords

Differential Expression Detection, Gene Expression Array Analysis, Microarray
Default Versions

Linux 64: 3.5
OS X INTEL: 3.5
Developers

Anders Krogh, Kevin Karplus, Richard Hughey, SAM Developer Group