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Supported Applications

ROME System

  • Description

    (Refinement and Optimization via Machine lEarning for cryo-EM) a parallel computing software system dedicated for high-resolution cryo-EM structure determination and data analysis, which implements advanced machine learning approaches in modern computer sciences and runs natively in an HPC environment.

  • Usage

    To list all executables provided by ROME System, run: $ sbgrid-list rome-system Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install rome-system Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Primary Citation*

    J. Wu, Y.-B. Ma, C. Congdon, B. Brett, S. Chen, Y. Xu, Q. Ouyang, and Y. Mao. 2017. Massively parallel unsupervised single-particle cryo-EM data clustering via statistical manifold learning. PLoS ONE. 12(8): e0182130.

    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  1.1.0 (876.6 MB)
    OS X INTEL:  1.1.0 (561.6 MB)

  • Developers

    Youdong Jack Mao, Jiayi Wu, Yongbei Ma