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Supported Applications

RnamlView

  • Description

    a visualization tool that displays/edits 2-dimensional diagrams of RNA/DNA secondary structures with tertiary interactions created by RNAView. It generates standard molecular representations (e.g. tRNA cloverleaf structures) or any structural representations by rearranging various parts (e.g helices and single strands) of the RNAView 2D diagrams. RNA motifs are rapidly identified and classified with the base pair annotation and the 2D graphic display.

  • Usage

    To list all executables provided by RnamlView, run: $ sbgrid-list rnamlview Copy to clipboard

  • Usage Notes

    Got an email from ndbadmin that RNA View and RnamIView are freely available to the public without any restrictions.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install rnamlview Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    N. Leontis and E. Westhof. 2001. Geometric nomenclature and classification of RNA base pairs. RNA. 7(4): 499-512.


    • *Full citation information available through

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