Supported Applications
pytom-match-pick
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Description
a GPU accelerated python module to significantly improve the speed and sensitivity using template matching to detect macromolecules from tomograms.
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Usage
To list all executables provided by pytom-match-pick, run:$ sbgrid-list pytom-match-pick
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install pytom-match-pick
Available operating systems: Linux 64 -
Primary Citation*
M. L. Chaillet, S. Roet, R. C. Veltkamp, and &. F. Förster. 2025. pytom-match-pick: A tophat-transform constraint for automated classification in template matching. Journal of Structural Biology: X. Science Direct. 11.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64:  0.10.0 (2.8 GB)
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Other Versions
Linux 64:
0.7.2 (3.1 GB) , 0.9.0 (2.8 GB)
Developers
Friedrich Foerster, Sander Roet, Marten L Chaillet