Supported Applications
pyRMSD
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Description
a python package that offers RMSD calculations on large sets of structures, especially large pairwise RMSD matrices through multiple algorithmic implementations.
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Usage
To list all executables provided by pyRMSD, run:$ sbgrid-list pyrmsd
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install pyrmsd
Available operating systems: Linux 64, OS X INTEL -
Primary Citation*
V. A. Gil and &. V. Guallar. 2013. pyRMSD: a Python package for efficient pairwise RMSD matrix calculation and handling. Bioinformatics. Oxford Academic. 29(18): 2363-2364.
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*Full citation information available through
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Keywords
Analysis, Python Module, Statistical Analysis, Structural Biology, Structure Visualization & Analysis
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Default Versions
Linux 64:  4.3.2 (1.8 GB)
OS X INTEL:  4.3.2 (1.6 GB) -
Developers
Andrej Sali