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Supported Applications

ProteinMPNN

  • Description

    is a deep learning based protein sequence design method.

  • Usage

    To list all executables provided by ProteinMPNN, run: $ sbgrid-list proteinmpnn Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install proteinmpnn Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    J. Dauparas, I. Anishchenko, N. Bennett, H. Bai, R. J. Ragotte, L. F. Milles, B. I. M. Wicky, A. Courbet, R. J. de Haas, N. Bethel, P. J. Y. Leung, T. F. Huddy, S. Pellock, D. Tischer, F. Chan, B. Koepnick, H. Nguyen, A. Kang, B. Sankaran, A. K. Bera, N. P. King, and D. Baker. 2022. Robust deep learning-based protein sequence design using ProteinMPNN. Science. 378(6615): 49-56.


    • *Full citation information available through

  • Keywords

    Machine Learning

  • Default Versions

    Linux 64:  20220819 (1.4 GB)
    OS X INTEL:  20220819 (1.4 GB)

  • Developers

    Justas Dauparas, David Baker

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