Supported Applications
ProDy
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Description
a protein structural dynamics analysis software package.
ProDy is installed as a module within python.
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install prody
Available operating systems: Linux 64, OS X INTEL -
Primary Citation*
A. Bakan, L. M. Meireles, and I. Bahar. 2011. ProDy: Protein Dynamics Inferred from Theory and Experiments. Bioinformatics. 27(11): 1575-1577.
S. Zhang, J. M. Krieger, Y. Zhang, C. Kaya, B. Kaynak, K. Mikulska-Ruminska, P. Doruker, H. Li, and I. Bahar. 2021. ProDy 2.0: Increased Scale and Scope after 10 Years of Protein Dynamics Modelling with Python. Bioinformatics. 37(20): 3657-3659.
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*Full citation information available through
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Webinars
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Keywords
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Default Versions
Linux 64:  2.3.1 (1.2 GB)
OS X INTEL:  2.3.1 (512.0 MB) -
Other Versions
Linux 64:
1.10.7 (315.0 MB) , 1.11 (383.5 MB) , 1.8.2 (313.4 MB) , 1.9.4 (316.1 MB) , 2.0.2 (463.1 MB) -
OS X INTEL:
1.10.7 (236.6 MB) , 1.11 (456.3 MB) , 1.8.2 (235.1 MB) , 1.9.4 (238.0 MB) , 2.0.2 (535.8 MB)
Developers
Chakra Chennubhotla, Ivet Bahar