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Supported Applications

NETBLAST

  • Description

    a simple command-line program that allows you to submit a single file of FASTA sequences over an internet connection to the NCBI BLAST databases. Searches are submitted through the client to the NCBI servers and do not need to download the databases locally (also called netblast and blastcl3).

  • Usage

    To list all executables provided by NETBLAST, run: $ sbgrid-list netblast Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install netblast Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    S. F. Altschul, W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J Mol Biol. 215(3): 403-410.


    • *Full citation information available through

  • Keywords

    Other

  • Default Versions

    Linux 64:  2.2.25 (9.0 MB)
    OS X INTEL:  2.2.25 (13.3 MB)

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