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Supported Applications

ModelAngelo

  • Description

    an automatic atomic model building program for cryo-EM maps.

  • Usage

    To list all executables provided by ModelAngelo, run: $ sbgrid-list modelangelo Copy to clipboard
  • Usage Notes

    It is highly recommended to have access to GPUs with at least 8GB of memory. ModelAngelo performs well on NVIDIA GPUs such as 2080's and beyond.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install modelangelo Copy to clipboard Available operating systems: Linux 64
  • Primary Citation*

    K. Jamali, D. Kimanius, and S. Scheres. 2022. ModelAngelo: Automated Model Building in Cryo-EM Maps. arXiv:2210.00006 [q-bio.QM].


    • *Full citation information available through

  • Webinars

    ModelAngelo

    Topic: Automated atomic modeling for cryo-EM maps.
    Presenter: Kiarash Jamali, PhD student, Scheres group, MRC Laboratory of Molecular Biology, Cambridge, UK.

    Host: Jason Key
    Recorded on: March 14, 2023

    For more information on ModelAngelo: https://github.com/3dem/model-angelo

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  1.0.12 (7.0 GB)

  • Other Versions

      Linux 64:

      1.0.1 (5.6 GB) , 1.0.5 (3.9 GB) , 1.0.6 (7.0 GB) , 1.0.7 (16.8 GB)
    • Common files size: 11.3 GB
  • Developers

    Kiarash Jamali, Sjors Scheres

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