Supported Applications


  • Description

    (Mixture-of-Isoforms) for isoform quantitation using RNA-Seq is a probabilistic framework that quantitates the expression level of alternatively spliced genes from RNA-Seq data, and identifies differentially regulated isoforms or exons across samples.

    MISO is installed as a standalone program and as a module within python.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install miso Copy to clipboard
  • Primary Citation*

    Y. Katz, E. T. Wang, E. M. Airoldi, and C. B. Burge. 2010. Analysis and design of RNA sequencing experiments for identifying isoform regulation. Nature Methods. 7: 1009-1015.

    • *Full citation information available through

  • Keywords

    Python Module

  • Default Versions

    Linux 64:  0.5.4
    OS X INTEL:  0.5.4

  • Other Versions

      Linux 64:

    • OS X INTEL:

  • Developers

    Yarden Katz