Supported Applications


  • Description

    Membrane segmentation in 3D for cryo-electron tomography (cryo-ET).

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install membrain-seg Copy to clipboard Available operating systems: Linux 64
  • Primary Citation*

    F. Isensee, P. F. Jaeger, S. A. A. Kohl, J. Petersen, and K. H. Maier-Hein. 2021. nnU-Net: a self-configuring method for deep learning-based biomedical image segmentation. Nature methods. 18(2): 203-211.

    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  e28baac (5.0 GB)

  • Developers

    Lorenz Lamm, Alister Burt, Benjamin Barad, Kevin Yamauchi, Ricardo Righetto