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ilastik

  • Description

    a simple, user-friendly tool for interactive image classification, segmentation and analysis. It is built as a modular software framework, which currently has workflows for automated (supervised) pixel- and object-level classification, automated and semi-automated object tracking, semi-automated segmentation and object counting without detection.

  • Usage

    To list all executables provided by ilastik, run: $ sbgrid-list ilastik Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install ilastik Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    C. Sommer, C. Straehle, U. Kothe, and F. A. Hamprecht. 2011. ilastik: Interactive Learning and Segmentation Toolkit. Eighth IEEE International Symposium on Biomedical Imaging (ISBI). 230-233.


    • *Full citation information available through

  • Keywords

    Other

  • Default Versions

    Linux 64:  1.4.0 (3.1 GB)
    OS X INTEL:  1.4.0 (2.9 GB)

  • Other Versions

      Linux 64:

      1.2.1 (2.2 GB) , 1.3.0 (2.0 GB) , 1.3.3 (1.2 GB) , 1.4.0-gpu (6.8 GB) , 1.4.1b7 (3.1 GB)

    • OS X INTEL:

      1.2.1 (1.8 GB) , 1.3.0 (1.2 GB) , 1.3.3 (1.0 GB) , 1.4.1b7 (2.4 GB)

  • Developers

    Fred Hamprecht

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