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Supported Applications

Focus

  • Description

    an interface for cryo-transmission electron microscopy (cryo-EM) data collection with computer image processing. Focus creates a user-friendly environment to import and manage data recorded by direct electron detectors and perform elemental image processing tasks in a high-throughput manner, while new data is being acquired at the microscope.

  • Usage

    To list all executables provided by Focus, run: $ sbgrid-list focus Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install focus Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    N. Biyani, R. D. Righetto, R. McLeod, D. Caujolle-Bert, D. Castano-Diez, K. N. Goldie, and H. Stahlberg. 2017. Focus: The interface between data collection and data processing in cryo-EM. bioRxiv.
    (Note: This article is a preprint and has not been peer-reviewed.)


    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  1.0.0 (143.4 MB)
    OS X INTEL:  1.0.0 (129.6 MB)

  • Other Versions

      Linux 64:

      0.9.1 (153.4 MB) , 20201022 (93.8 MB)

    • OS X INTEL:

      0.9.1 (235.1 MB) , 1.1.0_nightly (2.4 KB)

  • Developers

    Henning Stahlberg

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