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Supported Applications

Emap2sec+

  • Description

    a computational tool using deep learning that can accurately identify structures, alpha helices, beta sheets, other(coils/turns) and DNA/RNA, in cryo-EM maps of medium to low resolution.

  • Usage

    To list all executables provided by Emap2sec+, run: $ sbgrid-list emap2secplus Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install emap2secplus Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    X. Wang, E. Alnabati, T. W. Aderinwale, S. R. M. V. Subramaniya, G. Terashi, and D. Kihara. 2021. Detecting protein and DNA/RNA structures in cryo-EM maps of intermediate resolution using deep learning. Nature communications. 12(1): 2302.


    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  2.0 (1.6 GB)
    OS X INTEL:  2.0 (823.6 MB)

  • Developers

    Daisuke Kihara, Xiao Wang

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