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SBGridTV

Supported Applications

EBSeq

  • Description

    a Bioconductor software package installed in R 3.2.2 for gene and isoform differential expression analysis of RNA-seq data.

  • Usage Notes

    More information can also be found at: https://www.biostat.wisc.edu/~kendzior/EBSEQ/

    Graphical User Interface Manual also available at: https://www.biostat.wisc.edu/~ningleng/EBSeq_Package/EBSeq_Interface/EBSeq.Interface.Manual.pdf

  • Primary Citation*

    Leng, N., J. Dawson, J. Thomson, V. Ruotti, A. Rissman, B. Smits, J. Haag, M. Gould, R. Stewart, and C. Kendziorski. 2013. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics. Oxford Journals. 29(8): 1035-1043.

    • *Full citation information available through