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Supported Applications

DSSR

  • Description

    (Dissecting the Spatial Structure of RNA) a software tool for dissecting the spatial structure of RNA.

  • Usage

    To list all executables provided by DSSR, run: $ sbgrid-list dssr Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install dssr Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    X.-J. Lu, H. J. Bussemaker, and W. K. Olson. 2015. DSSR: an integrated software tool for dissecting the spatial structure of RNA. Nucleic Acids Research. 43(21): e142.


    • *Full citation information available through

  • Citation Note

    Please cite DSSR as follows: “RNA structures were analyzed using DSSR, a new component of the 3DNA suite of software programs” and include the primary citation listed above.

  • Webinars

    DSSR

    Topic: DSSR, a new 3DNA program for Defining the Secondary Structures of RNA from three-dimensional coordinates
    Presenter: Xiang-Jun Lu, Ph.D., Associate Research Scientist, Columbia University

    Host: Jason Key
    Recorded on June 26, 2014

  • Keywords

    Analysis

  • Default Versions

    Linux 64:  1.9.9-20200206 (1.2 MB)
    OS X INTEL:  1.9.9-20200206 (1.2 MB)

  • Other Versions

      Linux 64:

      1.4.7 (779.8 KB) , 1.5.2 (795.8 KB) , 1.6.5 (887.9 KB) , 1.7.2-20171120 (1.0 MB) , 1.9.2-20190506 (1.2 MB) , 1.9.4-20190708 (1.2 MB)

    • OS X INTEL:

      1.4.7 (851.8 KB) , 1.5.2 (841.1 KB) , 1.6.5 (948.7 KB) , 1.7.2-20171120 (987.8 KB) , 1.9.2-20190506 (1.1 MB) , 1.9.4-20190708 (1.1 MB)

  • Developers

    Xiang-Jun Lu

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