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Supported Applications

DSSP

  • Description

    a program that standardizes secondary structure assignment calculated from a coordinate file. Secondary structure prediction is not supported. Designed by Wolfgang Kabsch and Chris Sander

  • Usage

    To list all executables provided by DSSP, run: $ sbgrid-list dssp Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install dssp Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    W. Kabsch and C. Sander. 1983. Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers. 22(12): 2577-2637.


    • *Full citation information available through

  • Keywords

    Analysis

  • Default Versions

    Linux 64:  4.4.0 (9.0 MB)
    OS X INTEL:  2.2.0 (2.3 MB)

  • Other Versions

      Linux 64:

      20060404 (765.1 KB) , 2.0.4 (3.7 KB) , 2.1.0 (6.7 MB) , 2.2.0 (7.2 MB)

    • OS X INTEL:

      20060404 (155.6 KB) , 2.0.4 (175.5 MB) , 2.1.0 (175.9 MB)

  • Developers

    Gert Vriend, Robbie Joosten, Anastassis Perrakis, Maarten L Hekkelman

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