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AreTomo

  • Description

    (Alignment and Reconstruction for Electron Tomography) is a GPU-accelerated software package that provides an integrated solution to both fiducial-free alignment and reconstruction for cryoEM tomography.

  • Usage

    To list all executables provided by AreTomo, run: $ sbgrid-list aretomo Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install aretomo Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    S. Zheng, G. Wolff, G. Greenan, Z. Chen, F. G. A. Faas, M. Bárcena, A. J. Koster, Y. Cheng, and D. Agard. 2022. AreTomo: An integrated software package for automated marker-free, motion-corrected cryo-electron tomographic alignment and reconstruction. bioRxiv. 2022.02.15.480593.


    • *Full citation information available through

  • Keywords

    Electron Microscopy, Tomography

  • Default Versions

    Linux 64:  1.3.4 (39.6 MB)

  • Other Versions

      Linux 64:

      1.2.0 (25.2 MB) , 1.2.5 (28.7 MB) , 1.3 (34.1 MB) , 1.3.3 (31.1 MB)

  • Developers

    Shawn Zheng, David A Agard, Yifan Cheng

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