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Amber

  • Description

    a suite of biomolecular simulation programs. It began in the late 1970's, and is maintained by an active development community.

    The term "Amber" refers to two things. First, it is a set of molecular mechanical force fields for the simulation of biomolecules; these force fields are in the public domain, and are used in a variety of simulation programs. Second, it is a package of molecular simulation programs which includes source code and demos.

  • Usage

    To list all executables provided by Amber, run: $ sbgrid-list amber Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install amber Copy to clipboard Available operating systems: Linux 64

  • Webinars

    Free energy methods in Amber

    SBGrid webinars are hosted with partial support from the NIH R25 Continuing Education for Structural Biology Mentors #GM151273, in collaboration with Co-PI Jamaine Davis of Meharry Medical College.

    Topic: Free energy methods in Amber.

    Presenter: Professor Darrin York, Rutgers University.

    Host: Jason Key
    Recorded on May 14, 2024

    For more information on Amber:

    https://sbgrid.org/software/titles/amber
    https://theory.rutgers.edu/

  • Default Versions

    Linux 64:  22 (5.4 GB)

  • Other Versions

      Linux 64:

      18 (4.6 GB)
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