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Supported Applications

pdb_extract

  • Description

    a program suite that contains tools and examples for extracting data from many structure determination applications and assembles the data into mmCIF format for wwPDB deposition.

  • Usage

    To list all executables provided by pdb_extract, run: $ sbgrid-list pdb_extract Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install pdb_extract Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    H. Yang, V. Guranovic, S. Dutta, Z. Feng, H. M. Berman, and J. D. Westbrook. 2004. Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank. Acta Crystallographica Section D: Biological Crystallography. 60: 1833-1839.


    • *Full citation information available through

  • Citation Note

    Please cite the following url: http://pdb-extract.wwpdb.org/

  • Keywords

    Crystallography

  • Default Versions

    Linux 64:  3.25 (16.6 MB)
    OS X INTEL:  3.25 (16.7 MB)

  • Other Versions

      Linux 64:

      3.20 (18.8 MB) , 3.22 (16.2 MB) , 3.24 (16.2 MB)

    • OS X INTEL:

      3.20 (20.9 MB) , 3.22 (18.3 MB) , 3.24 (18.4 MB)

  • Developers

    RCSB Developer Group

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