Thursday, November 8th at 11:00am EST. Join us for a 30-minute Webinar: "An Introduction to Virtual Screening with Schrödinger 2012-2 on SBGrid Computing Clusters", presented by Jason Key, Structural Biology Computing Scientist at SBGrid.
on SBGrid Computing Clusters
Jason Key, Ph.D.
Structural Biology Computing Scientist
SBGrid, Harvard Medical School, Boston, MA
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Abstract: Virtual screening is a computational method for surveying immense libraries of chemical structures in order to identify compounds that are most likely to bind to a target molecule of interest. By docking each ligand candidate within a defined protein binding site and scoring the 3-D interaction in silico, libraries can be enriched for structures with desired receptor site complementarity. This approach can greatly reduce the time and expense of screening in the laboratory and is a common strategy in drug discovery. The Schrodinger software suite offers a complete platform to computationally screen biological macromolecules. Licenses to use this software are currently available to SBgrid members for academic use. In this presentation, I will provide a tutorial on how to get started with virtual screening in Schrodinger 2012-2 on SBgrid computing clusters. Preparation of compound databases for virtual screening, receptor preparation, and screening of protein receptors using Schrodinger Glide will be discussed.