News

SBGrid Afternoon Tea with Wladek Minor

Updated: March 27, 2014

Monday, January 9th at 4:00pm. Join us for a 30-minute Webinar on HKL2000, presented by Wladek Minor, Professor of Molecular Physiology and Biological Physics at University of Virginia Health System. HKL2000 Software information …

Upcoming Events

Updated: March 27, 2014

We have several new webinars in the works. In addition to the January HKL2000 presentation, we are scheduling presentations on CCPN and CCP4. Also in the planning stages is the launch of a …

Grid News

Updated: March 27, 2014

Our opportunity to join the Open Science Grid is getting closer. We took part in the weekly national conference call last week. Our petition to become an official Virtual Organization in the OSG …

Mac OS X Computing Tip: Moving the Dock with One Click

Updated: March 27, 2014

Have you ever been using a graphics intensive program that takes up your entire screen, only to have the Dock get in the way when you tried to change something?  Well, an easy …

MODELLER 6.2 installed

Updated: March 27, 2014

no graphical inerface, use for homology modeling. Requested by Hector.

SBGrid Morning Tea with Andrea Thorn

Updated: March 27, 2014

Thursday, September 19th at 11:00am EST, join us to hear Andrea Thorn, Marie-Curie Fellow from the MRC‐LMB in Cambridge, UK, give a 30-minute webinar describing the "New features in SHELX_2013". New features in …

SBGrid Afternoon Tea with Thomas Holder

Updated: March 27, 2014

Thursday, March 7th at 1:00pm EST -- Be sure to join us for a 30-minute webinar entitled "PyMOL Demo, Hints, and New Features" presented by Thomas Holder, PyMOL Developer at Schrodinger. PyMOL Demo, …

HKL2000: detector directory redefined to $HOME/hklinit

Updated: March 27, 2014

In previous distributions the location of X-ray detectors for HKL2000 was defined as /programs/i386-linux/hkl/hklint directory. The directory contained a set of detectors that were frequently used by members of Harrison Lab at HMS. …

AMD64 version of CNS 1.1 added.

Updated: March 27, 2014

labcshrc script will automatically configure AMD version for opteron processors.

IMOD, new versions installed

Updated: March 27, 2014

Two versions were installed - 3.3.5 is to run on 32-bit Linux platforms and 3.4.4 is to run on 64-bit Linux platforms. Platform on which program is to run is determined automatically via …

COOT installed

Updated: March 27, 2014

Linux, version 0.99

December Software Updates

Updated: March 27, 2014

Software updates will be sent to your laboratory on the night of Friday, December 22, 2006. The following software will be available after this weekend's updates: Electron microscopy users will now have access …

Mac Intel & PPC Startup Optimization

Updated: March 27, 2014

Feeling sluggish? We noticed that the initialization of the PowerMac branch was slower than the Linux branch. After analyzing and optimizing the script, we managed to improve initialization time on some systems 300%.

Computing Grid Update

Updated: March 27, 2014

Our 144 CPU computational grid is available to the SBGrid community through the General User Program at no extra charge (www.sbgrid.org/gup). This month’s awardees include Ethan Settembre for SAXS calculations. We are also …

Shelx, Chimera plus Mac OSX Updates

Updated: March 27, 2014

Shelx 97-2 has been updated to include additional programs. Chimera has been updated to 1.2065. Special versions of ccp4 apps and RAVE utls have been added to: /programs/i386-linux/gerard/proto/AMD64 /programs/i386-linux/ccp4/proto/AMD64 Additional Mac OSX programs: …

APBS installed!

Updated: March 27, 2014

Version 0.3.1 of APBS - a software package for the numerical solution of the Poisson-Boltzmann equation - is installed for Linux platform. It is ready to be used from within PYMOL. Please, send …

SPOCK upgraded!

Updated: March 27, 2014

The Linux version of SPOCK program has been upgraded to version 1.5-pre3. Please, send any information about problems to curator@sbgrid.org

6th International Conference on Structural Analysis of Supramolecular Assemblies by Hybrid Methods

Updated: March 27, 2014

Dear Colleagues: We are delighted to announce that the 6th International Conference on Structural Analysis of Supramolecular Assemblies by Hybrid Methods will be held from March 14-18, 2012 in Lake Tahoe, California at …

Software Updates (Sept 2006)

Updated: March 27, 2014

The new software will be available on your computers on Saturday, September 9th.The following applications will be updated in the process:CCP4 to version 6.0.1 – CCP4 version 6.0 is the most recent major …

SBGrid Morning Tea Break with Clemens Vonrhein

Updated: March 27, 2014

Tuesday, June 19th at 11:00am EST. Join us for a 30-minute Webinar presented by Clemens Vonrhein, Software Developer at Global Phasing Ltd. Clemens will speak about "Experimental phasing and structure solution with SHARP/autoSHARP" …