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  • The SBGrid Consortium provides structural biologists worldwide with access to the software they need to discover the shapes of the molecules of life. Read more in eLIFE and Acta Cryst.

  • SBCloud: AWS platform optimized for structural biology; pre-configured with scientific software for cryoEM & other techniques; user-friendly Open OnDemand interface; seamless Slurm job submission.

  • Capsules isolate the software runtime environment, encapsulating executables, libraries, and version-specific dependencies to provide conflict-free, zero-configuration access to structural biology software. Learn more.

  • The Project MAC display system, circa 1965. Read more about the history of molecular graphics software and UCSF Chimera in our SBGrid Tale featuring Bob Langridge and Tom Ferrin.

  • Train the Trainer Workshops: continuing education for structural biology mentors on cryoEM data processing workflows; resources PIs can take back to the laboratory. Funded by NIH R25 GM151273.

  • Personal Installation Manager: a structural biology app store; users install preferred applications/ versions on laptops or personal workstations, with graphical or CLI interfaces for Mac or Linux. More details.

SBGrid Consortium homepage

Recent Software Updates

Software updates
May 29 | DiffModeler

a diffusion model based protein complex structure modeling tool. >>

May 26 | outlierremoval

Implementation of outlier removal in cryo-electron microscopy (cryo-EM) datasets using radial profiles. The method focuses on removing outl… >>

May 25 | NMRPipe

a set of comprehensive facilities for Fourier processing of spectra in one to four dimensions, as well as a variety of facilities for spect… >>

May 23 | cryoPROS

a computational framework specifically designed to tackle misalignment errors caused by preferred orientation issues in single-particle cry… >>

May 21 | AreTomo3

a multi-GPU accelerated software package that enables real-time fully automated reconstruction of cryoET tomograms in parallel with cryoET … >>

May 18 | PyEM

a set of Python modules and command-line utilities for electron microscopy of biological samples. >>

May 13 | Spring

(Single Particle Reconstruction from Images of kNown Geometry) a single-particle based helical reconstruction package for electron cryo-mic… >>

May 13 | RELION

(REgularised LIkelihood OptimisatioN) a stand-alone computer program for Maximum A Posteriori (MAP) refinement of (multiple) 3D reconstruct… >>

May 13 | PSI4

is an open-source suite of ab initio quantum chemistry programs designed for efficient, high-accuracy simulations of molecular properties. >>

May 12 | Boltz-1

an open-source model which predicts the 3D structure of proteins, rna, dna and small molecules; it handles modified residues, covalent liga… >>

Thanks to the National Science Foundation

With partial support from the NIH R25 Continuing Education for Structural Biology Mentors #GM151273, in collaboration with Co-PI Jamaine Davis; the NSF Research Coordination Network MCB #0639193, and NSF EAGER #1448069. Please cite SBGrid's eLife paper and follow our publication guidelines.

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Latest upgrades from SBGrid, including latest software updates, new members and special events. Published montly by SBGrid.

SBGrid Webinar Series

Join us for our Software Webinar Series - Tuesdays at 12pm ET - to hear from software developers about what's new in structural biology. Community members connect via Zoom. Subscribe …

SBGrid/Harvard Shield

Capsules Technology

We have recently published a manuscript describing our Capsules technology used to deploy SBGrid and BioGrids software collections. Read more in Acta Cryst Section D, special 75th ICUR anniversary issue, …

Mind and Muscle

Mind and Muscle

From ancient Greece to modern day, people have often considered activities of the mind and muscle as fundamentally separate, even opposite, pursuits. Consider the contrasting stereotypes of a nerdy brainiac …

The Shapes of Energy

The Shapes of Energy

In Woods Hole, Mass., the Atlantic breeze mixes with the hum of microscopes and the chatter of biologists. There, in a summer neurobiology course, Luke Chao first became enthralled by …

Member publications

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