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63 Member Publications for June

Previous Month

Characterizing nitrogen cycling microorganisms and genes in sediments of the Three Gorges Reservoir.
1. PLoS One - published June 10, 2025
2. Han C, Chen Z, Xiao Y, Yang T, Shi H, Cao H, Yang W, Gong P
Structural determinants of PAR1 cleavage by activated protein C.
1. J Thromb Haemost - published June 9, 2025
2. Stojanovski BM, Di Cera E
Selective Flotation of Rutile from Chlorite Using a Combined CMC and SSF Depressant in a Benzohydroxamic Acid Collector System.
1. Langmuir - published June 9, 2025
2. Ren L, Gong P, Huang Y, Han G, Bao S, Zhang Y, Nguyen AV
The Flagellin-Specific Chaperone FliS of Borrelia burgdorferi Controls the Cytoplasmic Pool of Flagellins at the Level of Translation Initiation, Secretion, and Proteolysis.
1. Mol Microbiol - published June 9, 2025
2. Sze CW, Zhang K, Lynch MJ, Guo W, Liu J, Crane BR, Li C
Cell-based high-content approach for SARS-CoV-2 neutralization identifies unique monoclonal antibodies and PI3K pathway inhibitors.
1. Front Cell Dev Biol - published June 9, 2025
2. Cabel CR, Guzman BA, Alizadeh E, Li S, Holberg C, Wichaidit C, Cusanovich DA, Paek AL, Thatcher GRJ, Van Doorslaer K, Nargi RS, Sutton RE, Suryadevara N, Crowe JE Jr, Carnahan RH, Campos SK, Thorne CA
Data-Independent Acquisition Parallel Accumulation-Serial Fragmentation (diaPASEF) Analysis of the Separated Zebrafish Lens Improves Identifications.
1. J Am Soc Mass Spectrom - published June 9, 2025
2. Zelle SR, McDonald WH, Rose KL, Mchaourab HS, Schey KL
Development of Mutant M(3) Muscarinic Receptors Biased for G Protein Activation or Recruitment of β-Arrestins.
1. Biochemistry - published June 9, 2025
2. Meister J, Wanka L, Perry-Hauser NA, Liu L, Iverson TM, Gurevich VV, Beck-Sickinger AG, Kruse AC, Wess J
Small molecule disruption of RARα/NCoR1 interaction inhibits chaperone-mediated autophagy in cancer.
1. EMBO Mol Med - published June 9, 2025
2. McCabe M, Bhattacharyya R, Sereda R, Santiago-Fernández O, Khawaja RR, Diaz A, Lindenau K, Ozturk DG, Garner TP, Sidoli S, Cuervo AM, Gavathiotis E
pH Controlled Activation and Stabilization of Enzymes Using Responsive Polymer-Bioconjugates.
1. Biomacromolecules - published June 6, 2025
2. Rahman MS, Chandrarathne B, Bender K, Hinkle J, Page RC, Konkolewicz D
Identification and Characterization of the Biosynthesis of the Hybrid NRPS-NIS Siderophore Nocardichelin.
1. ACS Chem Biol - published June 6, 2025
2. Fisk MB, Barrera Ramirez J, Merrick CE, Wencewicz TA, Gulick AM
Multiomics analysis unveils key biomarkers during dynamic progress of IAV infection in mice.
1. Front Immunol - published June 6, 2025
2. Lei H, Xu Y, Zhang H, Zhang B, Luo W, Liu X, Zhang H, Yang J, Wen W, Wang P, Xu S
Strategy to overcome a nirmatrelvir resistance mechanism in the SARS-CoV-2 nsp5 protease.
1. Sci Adv - published June 6, 2025
2. Neilsen G, Lan S, Slack RL, Lorson ZC, Emanuelli Castaner A, Lee R, Edwards KG, Zhang H, Lee J, Cantara WA, Cilento ME, Zhang H, De R, Amblard F, Tedbury PR, Kirby KA, Schinazi RF, Sarafianos SG
The SH protein of mumps virus is a druggable pentameric viroporin.
1. Sci Adv - published June 6, 2025
2. Devantier K, Toft-Bertelsen TL, Prestel A, Kjær VMS, Sahin C, Giulini M, Louka S, Spiess K, Manandhar A, Qvortrup K, Ulven T, Bentzen BH, Bonvin AM, MacAulay N, Kragelund BB, Rosenkilde MM
Redefining the role of the EryM acetyltransferase in natural product biosynthetic pathways.
1. Structure - published June 5, 2025
2. Li Y, Liu X, Harris NR, Roberts JR, Valdivia EM, Ji X, Smith JL
General Maintenance and Reactivation of iSLK Cell Lines.
1. Bio Protoc - published June 5, 2025
2. Calderón-Zavala AC, Mendez AS, Heldwein EE
Unravelling CYP4V2: Clinical Features, Genetic Insights, Pathogenic Mechanisms and Therapeutic Strategies in Bietti Crystalline Corneoretinal Dystrophy.
1. Prog Retin Eye Res - published June 5, 2025
2. Jia R, Chen S, Li W, Zhang J, Qu B, Qiao J, Meng X, Yu S, Liu X, Xu B, Chen T, Shen X, Sun W, Dou H, Mahajan VB, Zhang Q, Yang L
Mechanism of human α3β GlyR regulation by intracellular M3/M4 loop phosphorylation and 2,6-di-tert-butylphenol interaction.
1. Nat Commun - published June 5, 2025
2. Liu X, Krezel M, Wang W
Pan-H7 influenza human antibody virus neutralization depends on avidity and steric hindrance.
1. JCI Insight - published June 5, 2025
2. Gilchuk IM, Dong J, Irving RP, Buchman CD, Armstrong E, Turner HL, Li S, Ward AB, Carnahan RH, Crowe JE Jr
GPR45 modulates Gα(s) at primary cilia of the paraventricular hypothalamus to control food intake.
1. Science - published June 5, 2025
2. Xun Y, Jiang Y, Xu B, Tang M, Ludwig S, Nakamura K, Mukhopadhyay S, Liu C, Beutler B, Zhang Z
The Fetal-to-Adult Hemoglobin Switch - Mechanism and Therapy.
1. N Engl J Med - published June 5, 2025
2. Orkin SH
Characterization of Hepatotropic Small Molecule Inhibitors of Hypoxia Inducible Factor Prolyl Hydroxylase in the Prevention of Oxygen-Induced Retinopathy.
1. J Med Chem - published June 4, 2025
2. Campla C, Hoppe G, Yu M, Woda J, Peachey NS, Josyula VP, Stauffer SR, Sears JE
Tetrahydropyrido[4,3-d]pyrimidines as a new active scaffold for human topoisomerase II inhibitors.
1. Sci Rep - published June 4, 2025
2. Brindani N, La Serra MA, Ortega JA, Arencibia JM, Nigro M, Bertozzi SM, Armirotti A, Borgogno M, Sissi C, De Vivo M
Neuroendocrine cells orchestrate regeneration through Desert hedgehog signaling.
1. Cell - published June 3, 2025
2. Kong W, Lu WJ, Dubey M, Suryawanshi RK, Vijayakumar S, Jeong Y, Gombar S, Diehn M, Shin K, Ott M, Chien YH, Sarin KY, Desai TJ, Beachy PA
Biophysical and structural analysis of KRAS switch-II pocket inhibitors reveals allele-specific binding constraints.
1. J Biol Chem - published June 3, 2025
2. Alexander P, Chan AH, Rabara D, Swain M, Larsen EK, Dyba M, Chertov O, Ashraf M, Champagne A, Lin K, Maciag A, Gillette WK, Nissley DV, McCormick F, Simanshu DK, Stephen AG
Substrate recognition and allosteric regulation of synaptic vesicle glutamate transporter VGLUT2.
1. Nat Struct Mol Biol - published June 3, 2025
2. Li F, Eriksen J, Oses-Prieto JA, Gomez YK, Xu H, Hareendranath S, Das P, Finer-Moore J, Nguyen P, Bowen A, Nelson A, Burlingame A, Grabe M, Stroud RM, Edwards RH
Antimicrobial Activity of Brilacidin against E. coli.
1. ACS Infect Dis - published June 3, 2025
2. Wilhelm MJ, Sharifian Gh M, Mensa B, Howell GL, DeGrado WF, Dai HL
Structural and functional basis of mechanosensitive TMEM63 channelopathies.
1. Neuron - published June 2, 2025
2. Zheng W, Lowry AJ, Smith HE, Xie J, Rawson S, Wang C, Ou J, Sotomayor M, Fu TM, Yang H, Holt JR
Lignin Removal in Subcellular Location of Poplar Cell Wall During Pretreatment Significantly Impacts Cellulose Digestibility.
1. ACS Sustain Chem Eng - published June 2, 2025
2. Zhang J, Kang L, Shen W, Collings C, Gong H, Vander Meulen K, Fox BG, Gilcher E, Dumesic JA, Ding SY
Transitions in the proteome and phospho-proteome during Xenopus laevis development.
1. Dev Biol - published June 2, 2025
2. Van Itallie E, Sonnett M, Kalocsay M, Wühr M, Peshkin L, Kirschner MW
A deoxynucleoside triphosphate triphosphohydrolase promotes cell cycle progression in Caulobacter crescentus.
1. J Bacteriol - published June 2, 2025
2. Hellenbrand CN, Stevenson DM, Gromek KA, Amador-Noguez D, Hershey DM
Biochemistry of Heat Shock Proteins From Human Intracellular Protozoan Parasites as Diagnostic and Therapeutic Biomarkers.
1. Biochemistry - published June 2, 2025
2. Chakafana G, Zininga T
Type I interferon autoantibody footprints reveal neutralizing mechanisms and allow inhibitory decoy design.
1. J Exp Med - published June 2, 2025
2. Groen K, Kuratli R, Enkelmann J, Fernbach S, Wendel-Garcia PD, Staiger WI, Lejeune M, Sauras-Colón E, Roche-Campo F, Filippidis P, Rauch A, Swiss HIV Cohort Study, Trkola A, Günthard HF, Kouyos RD, Brugger SD, Hale BG
The postsynaptic density in excitatory synapses is composed of clustered, heterogeneous nanoblocks.
1. J Cell Biol - published June 2, 2025
2. Sun R, Allen JP, Mao Z, Wilson L, Haider M, Alten B, Zhou Z, Wang X, Zhou Q
Importin-9 and a TPR domain protein MpH drive periodic patterning of ciliary arrays in Tetrahymena.
1. J Cell Biol - published June 2, 2025
2. Deraniyagala AS, Maier W, Parra M, Nanista E, Sowunmi DO, Hassan M, Chasen N, Sharma S, Lechtreck KF, Cole ES, Bernardes N, Chook YM, Gaertig J
Neuronal ALKAL2 and its ALK receptor contribute to the development of colitis-associated colorectal cancer.
1. Proc Natl Acad Sci U S A - published June 1, 2025
2. Delanne-Cuménal M, Defaye M, Delanne-Cuménal A, Ahmed M, Ho V, Abdullah NS, Alhassoun M, Svendsen K, Mager L, Schlessinger J, Hirota S, Altier C
A nucleotide-independent, pan-RAS-targeted DARPin elicits anti-tumor activity in a multimodal manner.
1. Mol Oncol - published June 1, 2025
2. Kapp JN, Verdurmen WPR, Schaefer JV, Kopra K, Nagy-Davidescu G, Richard E, Nokin MJ, Ernst P, Tamaskovic R, Schwill M, Degen R, Scholl C, Santamaria D, Plückthun A
An ABCB11 variant registry and novel knockin mouse model of PFIC2 based on the clinically relevant ABCB11 E297G variant.
1. J Lipid Res - published June 1, 2025
2. Bell EL, Truong JK, Jo Y, Kolpak A, Chunn L, Syverud N, Mahinic M, Durrant JR, Hoch E, Reddy B, Stoiber P, Miller JP, Ren Y, Moore J, Hughes RO, Garfield AS
Transient glycan shield reduction induces CD4-binding site broadly neutralizing antibodies in SHIV-infected macaques.
1. Cell Rep - published June 1, 2025
2. Morris DJ, Gorman J, Zhou T, Lora J, Connell AJ, Li H, Liu W, Roark RS, Campion MS, Carey JW, Habib R, Li Y, Martella CL, Park Y, Singh A, Sowers KJ, Teng IT, Wang S, Chohan N, Ding W, Lauer C, Lewis E, Mason RD, Rando JM, Peyton L, Schramm CA, Wagh K, Korber B, Seaman MS, Douek DC, Haynes BF, Kulp DW, Roederer M, Hahn BH, Kwong PD, Shaw GM
Mutation of an active site-adjacent residue in VIM indirectly dictates interactions with and blunts inhibition by D-captopril.
1. J Inorg Biochem - published June 1, 2025
2. Silwal SB, Wamsley B, Wang Z, Gung BW, Nix JC, Page RC
Nanobodies targeting EGFR provide insight into conformations stabilized by glioblastoma mutations.
1. J Biol Chem - published June 1, 2025
2. Watson SM, Harvey EP, Pishesha N, Ploegh HL, Springer TA
Clinicopathologic Features of Untreated Colorectal Cancer with Acellular Mucin-Only Lymph Nodes.
1. Mod Pathol - published June 1, 2025
2. Luo W, Hu S, Riahi IR, Wang HL, Shaker N, Abukhiran I, Wang T, Polydorides AD, Akinsanya A, González IA, Hagen C, Graham RP, Lisovsky M, Longacre TA, Challa B, Chen W, Harter D, Beech C, Najibi M, Cao W, Lee M, Lagana SM, Liao X, Setia N, Westbrook LM, Chandan VS, Choi WT, Ding X, Gonzalez RS, Gopal P, Lee H, Navale P, Liu X, Panarelli NC, Yang Z, Drage MG, Song Z, Li F, Nagtegaal ID, Zhang X
Design of SARS-CoV-2 RBD immunogens to focus immune responses toward conserved coronavirus epitopes.
1. J Virol - published June 1, 2025
2. Harris C, Kapingidza AB, San JE, Christopher J, Gavitt T, Rhodes B, Janowska K, O'Donnell C, Lindenberger J, Huang X, Sammour S, Berry M, Barr M, Parks R, Newman A, Overton M, Oguin T 3rd, Acharya P, Haynes BF, Saunders KO, Wiehe K, Azoitei ML
Switchable client specificity in a dual functional chaperone coordinates light-harvesting complex biogenesis.
1. Sci Adv - published June 1, 2025
2. Siegel AR, Kroon G, Zhao C, Wang P, Wright PE, Shan SO
Structural insights into the activation and inhibition of the ADAM17-iRhom2 complex.
1. Proc Natl Acad Sci U S A - published June 1, 2025
2. Maciag JJ, Slone CE, Alnajjar HF, Rich MF, Guion B, Ifergan I, Blobel CP, Seegar TCM
Priming or Boosting P. falciparum Transmission Blocking Responses with Recombinant Vaccines or Gametocyte Extract.
1. J Infect Dis - published June 1, 2025
2. Song Y, Deng B, Long CA, Li Q, Diakite M, Huang WC, Zhou S, Luo Y, Ivanochko D, MacGill RS, Julien JP, Miura K, Lovell J
Disassembly activates Retron-Septu for antiphage defense.
1. Science - published June 1, 2025
2. Wang C, Rish AD, Armbruster EG, Xie J, Loveland AB, Shen Z, Gu B, Korostelev AA, Pogliano J, Fu TM
SARS-CoV-2 nsp15 enhances viral virulence by subverting host antiviral defenses.
1. Proc Natl Acad Sci U S A - published June 1, 2025
2. Caobi A, Su CM, Beusch CM, Kenney D, Darling TL, Feng S, Semaan M, Wacquiez A, Sanders NL, Tully ES, Chen DY, Evdokimova M, Ding Z, Jones D, Alysandratos KD, Mizgerd JP, Kirchdoerfer RN, Kotton DN, Douam F, Crossland NA, Boon ACM, Gordon DE, Baker SC, Saeed M
BBO-10203 inhibits tumor growth without inducing hyperglycemia by blocking RAS-PI3Kα interaction.
1. Science - published June 1, 2025
2. Simanshu DK, Xu R, Stice JP, Czyzyk DJ, Feng S, Denson JP, Riegler E, Yang Y, Zhang C, Donovan S, Smith BP, Abreu-Blanco M, Chen M, Feng C, Fu L, Rabara D, Young LC, Dyba M, Yan W, Lin K, Ghorbanpoorvalukolaie S, Larsen EK, Malik W, Champagne A, Parker K, Ju JH, Jeknic S, Esposito D, Turner DM, Lightstone FC, Wang B, Wehn PM, Wang K, Stephen AG, Maciag AE, Hata AN, Sinkevicius KW, Nissley DV, Wallace EM, McCormick F, Beltran PJ
Flagellar switch inverted repeats impact heterogeneity in flagellar gene expression and thus C. difficile RT027/MLST1 virulence.
1. Cell Rep - published June 1, 2025
2. Nhu NTQ, Lin H, Pigli Y, Sia JK, Kuhn P, Ruppel H, Snitkin ES, Young VB, Kamboj M, Pamer EG, Rice PA, Shen A, Dong Q
Global siRNA screen identifies human host factors critical for SARS-CoV-2 replication and late stages of infection.
1. PLoS Biol - published June 1, 2025
2. Yin X, Pu Y, Yuan S, Pache L, Churas C, Weston S, Riva L, Simons LM, Cisneros WJ, Clausen T, Biddle G, Doss-Gollin S, Deming M, De Jesus PD, Kim HN, Fuentes D, Whitelock JM, Esko JD, Lord MS, Mena I, García-Sastre A, Hultquist JF, Frieman MB, Ideker T, Pratt D, Martin-Sancho L, Chanda SK
Nonstabilized SARS-CoV-2 spike mRNA vaccination induces broadly neutralizing antibodies in nonhuman primates.
1. Sci Transl Med - published June 1, 2025
2. Malewana RD, Stalls V, May A, Lu X, Martinez DR, Schäfer A, Li D, Barr M, Sutherland LL, Lee E, Parks R, Beck WE, Newman A, Bock KW, Minai M, Nagata BM, DeMarco CT, Denny TN, Oguin TH 3rd, Rountree W, Wang Y, Mansouri K, Edwards RJ, Smith L, Sempowski GD, Eaton A, Muramatsu H, Henderson R, Tam Y, Barbosa C, Tang J, Cain DW, Santra S, Moore IN, Andersen H, Lewis MG, Golding H, Seder R, Khurana S, Montefiori DC, Pardi N, Weissman D, Baric RS, Acharya P, Haynes BF, Saunders KO
RosettaAMRLD: A Reaction-Driven Approach for Structure-Based Drug Design from Combinatorial Libraries with Monte Carlo Metropolis Algorithms.
1. J Chem Inf Model - published June 1, 2025
2. Tang Y, Moretti R, Meiler J
Searching for Synthetic Opioid Rescue Agents. 2: Identification of an Ultra-Potent Synthetic Opioid Rescue Agent.
1. J Med Chem - published June 1, 2025
2. Martin J, Onyameh E, Luo D, Powell JW, Trivedi RR, Woloshin EJ, Zhang Y, Shaykin JD, Denehy ED, Alsum AR, Prantzalos E, Jiang Q, Che T, Alilain WJ, Turner JR, Bardo MT, Prisinzano TE
Modulation of SARS-CoV-2 spike binding to ACE2 through conformational selection.
1. Nat Nanotechnol - published June 1, 2025
2. Saha P, Fernandez I, Sumbul F, Valotteau C, Kostrz D, Meola A, Baquero E, Sharma A, Portman JR, Stransky F, Boudier T, Guardado-Calvo P, Gosse C, Strick T, Rey FA, Rico F
Protecting bacteriophages under UV irradiation with brilliant blue FCF for targeted bacterial control.
1. Biofilm - published June 1, 2025
2. Wdowiak M, Magiera A, Tomczyńska M, Adamkiewicz W, Stellacci F, Paczesny J
Solution mapping of MHC-I:TCR interactions using a minimalistic protein system.
1. Proc Natl Acad Sci U S A - published June 1, 2025
2. Woodward CH, Chaudhuri A, Chen XT, White WL, Garcia KC, Baker D, Sgourakis NG
Assembly and activation of the death-inducing signaling complex.
1. Proc Natl Acad Sci U S A - published June 1, 2025
2. Fosuah E, Shen Z, Xie J, Wang C, Lin Q, Fu TM
CACNA1D is a circadian gene and causes familial advanced sleep phase.
1. Proc Natl Acad Sci U S A - published June 1, 2025
2. Webb JM, Abderemane-Ali F, Ashbrook L, Ma M, Nibber N, Zou X, Yamazaki M, Wohler E, Sobreira N, Minor DL Jr, Fu YH, Ptáček LJ
Structure and organization of full-length epidermal growth factor receptor in extracellular vesicles by cryo-electron tomography.
1. Proc Natl Acad Sci U S A - published June 1, 2025
2. Gonzalez-Magaldi M, Gullapalli A, Papoulas O, Liu C, Leung AY, Guo L, Brilot AF, Marcotte EM, Ke Z, Leahy DJ
Lysine acetylation modulates s-OPA1 GTPase activity and oligomerization in mitochondrial membrane remodeling.
1. Protein Sci - published June 1, 2025
2. Jabbar J, Afroze B, Ling NXY, Oakhill JS, Rouiller I
AI-based quality assessment methods for protein structure models from cryo-EM.
1. Curr Res Struct Biol - published June 1, 2025
2. Zhu H, Terashi G, Farheen F, Nakamura T, Kihara D
Enhanced genotype-phenotype analysis using multimodal adaptive optics and 3D protein structure in Bietti Crystalline Dystrophy.
1. Am J Ophthalmol Case Rep - published June 1, 2025
2. Kumar A, Sun YJ, Rasmussen DK, Hargrave A, Phillips C, Vu JT, Costa MGS, Leung LB, Yu C, Dubra A, Mahajan VB
Corrigendum to "STING guides the STX17-SNAP29-VAMP8 complex assembly to control autophagy" [Cell Insight 3 (2024) 100147].
1. Cell Insight - published June 1, 2025
2. Song X, Xi Y, Dai M, Li T, Du S, Zhu Y, Li M, Li Y, Liu S, Ding X, Yao X, Lai Y, Liu X