Installing SBGrid Software
Using the SBGrid Environment
Support for Site Administrators
Hardware Support Notes
Getting Help
Support for Developers
Actual packages installed by site vary depending on licensing and requests. Packages can be removed on request.
210.8G x86_64-linux [++++++++++++++++++++++++++++++++++++++++++++++]
173.2G i386-mac [+++++++++++++++++++++++++++++++++++++ ]
18.0G share [+++ ]
1.9K local [ ] 24.5G schrodinger [+++++++++++++++++++++++++++++++++++]
16.6G rosetta [+++++++++++++++++++++++ ]
15.7G phenix [++++++++++++++++++++++ ]
10.5G ccp4 [++++++++++++++ ]
8.2G system [+++++++++++ ]
6.7G scipion [+++++++++ ]
6.2G ambertools [++++++++ ]
6.1G coot [++++++++ ]
5.8G orca [++++++++ ]
5.5G ilastik [+++++++ ]
5.3G pyrosetta [+++++++ ]
5.2G spider [+++++++ ]
4.9G anaconda [+++++++ ]
4.2G xplor [+++++ ]
3.9G nmrpipe [+++++ ]
3.7G xmipp [+++++ ]
3.5G molprobity [++++ ]
3.3G dials [++++ ]
3.1G divcon [++++ ]
3.0G ccp4mg [++++ ]
2.8G spring [+++ ]
2.6G dynamo [+++ ]
2.4G python [+++ ]
2.3G mageckvispr [+++ ]
2.2G atsas [+++ ]
2.2G chimera [+++ ]
2.2G pymol [+++ ]
2.1G eman2 [++ ]
2.1G relion [++ ]
1.9G blastplus [++ ]
1.7G rstudio [++ ]
1.6G geneious [++ ]
1.5G peet [++ ]
1.2G frealign [+ ]
1.1G csrosetta [+ ]
1.1G arp_warp [+ ]
1.1G imp [+ ]
1.1G iplt [+ ]
1.0G cns [+ ]
1.0G bsoft [+ ]
998.6M haddock [+ ]
968.3M ccpnmr [+ ]
933.4M buster [+ ]
826.3M shiftx2 [+ ]
819.2M emboss [+ ]
812.9M autoproc [+ ]
807.6M em2em [+ ]
783.1M mgltools [+ ]
719.1M whatif [+ ]
717.9M rcsbtools [+ ]
702.1M imagic [ ]
643.8M r [ ]
612.8M whatcheck [ ]
599.4M qt [ ]
575.7M vlion [ ]
560.3M fiji [ ]
532.9M imagemagick [ ]
494.4M 3dna [ ]
472.7M caver [ ]
470.3M shelx-2013 [ ]
442.1M balbes [ ]
427.7M mrc [ ]
416.9M ultrascan3 [ ]
408.4M gromacs [ ]
405.6M relax [ ]
401.7M talosn [ ]
387.0M pdb_redo [ ]
381.8M hkl [ ]
374.6M dtrek_free [ ]
358.3M imod [ ]
352.1M motioncorr [ ]
334.9M modeller [ ]
333.2M 2dx [ ]
313.6M gorgon [ ]
297.7M perl [ ]
257.6M albula [ ]
251.1M simple [ ]
235.0M lafire [ ]
225.9M arcimboldo_lite [ ]
219.0M mifit [ ]
215.6M apbs [ ]
210.9M openbabel [ ]
209.4M imagej [ ]
206.8M solve [ ]
204.0M cryoemtools [ ]
192.6M shelx [ ]
190.1M theseus [ ]
188.9M crystfel [ ]
188.6M caver_analyst [ ]
186.5M avogadro [ ]
179.5M norma [ ]
179.4M blast [ ]
177.5M sassie [ ]
175.3M namd [ ]
169.4M jalview [ ]
167.2M vmd [ ]
162.8M specview [ ]
158.1M gctf [ ]
154.4M mafft [ ]
153.6M imod_nma [ ]
153.3M tigris [ ]
152.7M ctffind4 [ ]
147.9M pytom [ ]
144.8M tcltk [ ]
139.8M frodock [ ]
132.1M imosflm [ ]
131.7M aria [ ]
131.0M spire [ ]
130.4M raw [ ]
127.2M fuda [ ]
126.7M openmm [ ]
123.1M fasta [ ]
120.5M igv [ ]
117.8M unio [ ]
106.4M gamma [ ]
102.3M breseq [ ]
100.3M imodfit [ ]
97.4M prospect [ ]
89.6M urox [ ]
88.6M xdsgui [ ]
86.8M emip [ ]
85.7M wxpython [ ]
79.5M tcoffee [ ]
77.3M vmd-xplor [ ]
76.7M gnuplot [ ]
73.3M cara [ ]
72.6M sparky [ ]
71.4M xds [ ]
69.7M ghostscript [ ]
68.5M suprim [ ]
67.0M protomo [ ]
66.8M globus_connect_personal [ ]
66.7M rsref [ ]
65.8M eman [ ]
60.3M priism [ ]
57.1M mosflm [ ]
56.7M pdb2pqr [ ]
55.7M como [ ]
55.5M gefrealign [ ]
54.1M auto3dem [ ]
48.3M mag_distortion [ ]
47.9M dock [ ]
47.5M bnp [ ]
47.4M dps [ ]
46.4M unblur [ ]
45.6M ultrascan [ ]
45.4M saxsview [ ]
44.0M mmtsb [ ]
42.1M ruby [ ]
42.1M gerard [ ]
41.7M resmap [ ]
40.7M simulaid [ ]
40.3M refmac [ ]
40.0M nmrview [ ]
39.5M staden [ ]
35.8M mead [ ]
34.1M graphviz [ ]
33.0M appion [ ]
32.7M sharp [ ]
32.3M scatter [ ]
30.7M stamp [ ]
30.3M pymmlib [ ]
29.9M profphd [ ]
29.5M fpocket [ ]
29.5M eden [ ]
28.3M procheck [ ]
28.1M ringer [ ]
27.9M sam [ ]
27.2M phases [ ]
26.5M scwrl3 [ ]
26.1M summovie [ ]
25.6M miso [ ]
25.3M ctf [ ]
25.0M rasmol [ ]
23.2M ihrsr [ ]
22.1M r2r [ ]
21.7M nessy [ ]
21.6M finddqe [ ]
21.6M zephyr [ ]
21.5M snb [ ]
21.4M scwrl4 [ ]
20.1M wattos [ ]
20.1M rdock [ ]
19.7M bbhp [ ]
19.3M concoord [ ]
18.4M hole [ ]
18.2M clustal [ ]
18.2M rsref2000 [ ]
17.7M escet [ ]
17.7M adxv [ ]
17.6M phylip [ ]
17.4M cmview [ ]
17.2M replace [ ]
17.1M direx [ ]
17.0M mole [ ]
16.5M redcat [ ]
16.3M remediator [ ]
16.2M molmol [ ]
16.0M mrtailor [ ]
15.5M xdrawchem [ ]
15.5M dssp [ ]
15.3M ligplus [ ]
15.2M knuspr [ ]
15.2M gautomatch [ ]
15.0M main [ ]
14.5M situs [ ]
14.2M promals [ ]
14.1M xeasy [ ]
13.6M epmr [ ]
13.4M assemble2 [ ]
13.4M o [ ]
13.2M rnamlview [ ]
13.2M xdsme [ ]
12.7M povray [ ]
12.5M pft3dr [ ]
11.9M phoelix [ ]
11.7M mcce [ ]
11.6M modelfree [ ]
11.4M particle [ ]
11.4M finchtv [ ]
11.3M tensor [ ]
10.8M samtools [ ]
10.7M frealix [ ]
10.5M hydropro [ ]
10.5M dyndom3d [ ]
10.0M x3d [ ]
9.9M espript [ ]
9.9M raster3d [ ]
9.3M embfactor [ ]
9.3M entangle [ ]
9.0M netblast [ ]
8.9M bcftools [ ]
8.8M isthms [ ]
8.5M amps [ ]
8.3M rnastructure [ ]
7.9M elves [ ]
7.3M spdbv [ ]
7.0M module [ ]
6.8M electra [ ]
6.2M pgplot [ ]
6.1M motioncor2 [ ]
6.0M a2ps [ ]
5.9M aqua [ ]
5.6M xv [ ]
5.6M nucplot [ ]
5.6M somore [ ]
5.2M delphi [ ]
5.1M grace [ ]
5.0M veda [ ]
4.6M plotutils [ ]
4.4M weblogo [ ]
4.3M curvesplus [ ]
4.2M xdsi [ ]
4.2M dino [ ]
4.1M zdock [ ]
4.0M vina [ ]
3.8M solvate [ ]
3.6M nedit [ ]
3.6M ace2 [ ]
3.6M xdsstat [ ]
3.3M ssaha2 [ ]
3.3M mmc [ ]
3.2M h5toxds [ ]
3.2M dyndom [ ]
3.1M scc [ ]
3.1M pdbstat [ ]
3.1M superfold [ ]
2.7M qushape [ ]
2.6M signature [ ]
2.6M aline [ ]
2.5M alscript [ ]
2.5M mammoth-mult [ ]
2.5M primer3 [ ]
2.4M tiltpicker [ ]
2.3M dssr [ ]
2.1M dogpicker [ ]
2.1M bfactor [ ]
2.0M hbplus [ ]
2.0M surfv [ ]
2.0M plotmtv [ ]
2.0M pales [ ]
1.9M quilt [ ]
1.9M diffmap [ ]
1.8M crop [ ]
1.8M pdbfixer [ ]
1.8M xdscc12 [ ]
1.7M bin2mrc [ ]
1.7M rnaview [ ]
1.6M best [ ]
1.6M molscript [ ]
1.5M wasp [ ]
1.5M xds-viewer [ ]
1.5M madbend [ ]
1.4M curves [ ]
1.4M xrayview [ ]
1.4M reduce [ ]
1.3M autodock [ ]
1.3M probe [ ]
1.3M randomize [ ]
1.2M untangle [ ]
1.2M raspnmr [ ]
1.2M cpmgfit [ ]
1.0M muscle [ ]
992.2K surfnet [ ]
990.8K pdb-care [ ]
926.8K hkl2map [ ]
911.1K rmerge [ ]
895.0K ligplot [ ]
891.9K naccess [ ]
821.0K hydronmr [ ]
738.2K dowser [ ]
641.8K bobscript [ ]
635.8K rmeasure [ ]
582.8K molphy [ ]
539.8K qpack [ ]
485.3K profit [ ]
427.3K shapemapper [ ]
416.5K samviewer [ ]
367.0K probcons [ ]
363.7K matt [ ]
334.9K tkdiff [ ]
297.1K mes [ ]
212.2K amigos2 [ ]
185.2K protskin [ ]
124.1K nuccyl [ ]
77.4K yup [ ]
76.0K surfrace [ ]
63.9K fastmodelfree [ ]
23.7K pipe2xeasy [ ]
2.3K clustal-omega [ ]
109 pandas [ ]
108 numpy [ ]
107 pysam [ ]
106 pytz [ ]
95 rcrane [ ]
85 ccpnmr-chembuild [ ]
82 sparx [ ]
74 biopython [ ]
72 ipython [ ]
70 scipy [ ]
61 ebseq [ ]
34 bioperl [ ] 25.8G schrodinger [+++++++++++++++++++++++++++++++++++++]
13.0G rosetta [++++++++++++++++++ ]
11.4G phenix [++++++++++++++++ ]
9.1G ccp4 [+++++++++++++ ]
8.8G pyrosetta [++++++++++++ ]
6.0G ambertools [++++++++ ]
5.3G orca [+++++++ ]
4.9G spring [+++++++ ]
4.1G ilastik [+++++ ]
3.8G anaconda [+++++ ]
3.8G spider [+++++ ]
3.4G csrosetta [++++ ]
3.3G pymol [++++ ]
3.2G python [++++ ]
3.2G molprobity [++++ ]
3.1G xmipp [++++ ]
2.8G nmrpipe [++++ ]
2.7G blastplus [+++ ]
2.5G system [+++ ]
2.5G ccp4mg [+++ ]
2.5G dials [+++ ]
2.5G atsas [+++ ]
2.4G xplor [+++ ]
2.3G chimera [+++ ]
1.6G mageckvispr [++ ]
1.6G relax [++ ]
1.4G geneious [+ ]
1.2G arp_warp [+ ]
1.2G coot [+ ]
1.1G ccpnmr [+ ]
1.1G cns [+ ]
1.1G whatcheck [+ ]
1021.4M eman2 [+ ]
1003.1M imp [+ ]
990.7M shiftx2 [+ ]
906.3M iplt [+ ]
888.3M 2dx [+ ]
862.8M mgltools [+ ]
843.5M emboss [+ ]
811.6M divcon [+ ]
805.5M rcsbtools [+ ]
802.7M em2em [+ ]
705.1M specview [ ]
701.8M r [ ]
652.0M buster [ ]
565.4M frealign [ ]
555.9M modeller [ ]
552.2M bsoft [ ]
534.1M imod [ ]
503.0M blast [ ]
499.2M ultrascan3 [ ]
496.2M 3dna [ ]
483.4M solve [ ]
472.7M caver [ ]
466.7M gromacs [ ]
463.5M fiji [ ]
455.4M gorgon [ ]
452.4M balbes [ ]
428.3M dynamo [ ]
395.1M talosn [ ]
379.9M pymmlib [ ]
372.0M hkl [ ]
366.7M autoproc [ ]
353.8M dssp [ ]
335.7M imosflm [ ]
330.9M qt [ ]
325.0M relion [ ]
323.8M mrc [ ]
305.2M ultrascan [ ]
301.2M rstudio [ ]
296.9M simple [ ]
274.7M albula [ ]
273.7M avogadro [ ]
254.0M imagemagick [ ]
236.1M shelx-2013 [ ]
227.4M lafire [ ]
213.8M eman [ ]
204.7M mafft [ ]
200.6M caver_analyst [ ]
196.0M cryoemtools [ ]
193.6M theseus [ ]
187.9M spdbv [ ]
183.6M perl [ ]
182.9M dtrek_free [ ]
171.6M rnastructure [ ]
170.4M auto3dem [ ]
164.8M apbs [ ]
164.6M spire [ ]
158.4M tcltk [ ]
151.4M igv [ ]
146.0M tigris [ ]
143.8M unio [ ]
143.0M raw [ ]
142.7M sparky [ ]
131.3M shelx [ ]
131.1M nmrview [ ]
126.0M vmd [ ]
125.6M crystfel [ ]
123.9M mosflm [ ]
120.8M openmm [ ]
120.3M refmac [ ]
119.9M jalview [ ]
111.5M breseq [ ]
107.2M clustal [ ]
105.5M xdsgui [ ]
104.8M dock [ ]
102.2M fasta [ ]
102.0M ghostscript [ ]
100.9M gamma [ ]
91.5M tcoffee [ ]
90.0M graphviz [ ]
77.2M vmd-xplor [ ]
74.3M wxpython [ ]
67.3M xds [ ]
65.8M priism [ ]
63.3M raspnmr [ ]
63.1M gerard [ ]
62.2M bbhp [ ]
58.5M pytom [ ]
56.0M como [ ]
55.1M ctffind4 [ ]
54.8M emip [ ]
54.7M sharp [ ]
53.4M namd [ ]
51.4M finchtv [ ]
50.6M pdb2pqr [ ]
49.8M openbabel [ ]
48.5M openmotif [ ]
46.8M staden [ ]
44.2M mmtsb [ ]
43.6M suprim [ ]
43.5M lib [ ]
42.9M ligplot [ ]
37.8M phoelix [ ]
37.4M simulaid [ ]
35.6M profphd [ ]
34.8M haddock [ ]
34.3M main [ ]
33.7M adxv [ ]
33.4M sam [ ]
32.9M xrayview [ ]
32.3M scatter [ ]
31.5M cara [ ]
31.4M aria [ ]
31.3M scwrl4 [ ]
31.0M knuspr [ ]
30.5M situs [ ]
29.2M stamp [ ]
29.2M ruby [ ]
29.1M pdb_redo [ ]
28.1M ringer [ ]
27.0M fpocket [ ]
26.2M pft3dr [ ]
25.8M o [ ]
25.5M globus_connect_personal [ ]
24.5M imodfit [ ]
24.4M phylip [ ]
24.0M raster3d [ ]
22.6M gnuplot [ ]
21.9M molmol [ ]
20.5M appion [ ]
20.4M ace2 [ ]
19.7M imagej [ ]
19.6M direx [ ]
19.2M promals [ ]
18.9M resmap [ ]
18.6M eden [ ]
18.3M ligplus [ ]
18.3M miso [ ]
17.9M xds-viewer [ ]
17.9M ctf [ ]
17.4M cmview [ ]
17.1M mole [ ]
16.9M redcat [ ]
16.7M snb [ ]
16.4M r2r [ ]
16.3M remediator [ ]
15.5M mrtailor [ ]
15.4M replace [ ]
13.4M assemble2 [ ]
13.3M netblast [ ]
13.2M xdsme [ ]
13.1M rnamlview [ ]
12.8M povray [ ]
12.7M mcce [ ]
12.7M reduce [ ]
12.5M mpich [ ]
11.2M hole [ ]
11.2M tensor [ ]
10.9M espript [ ]
10.9M nessy [ ]
10.6M dino [ ]
10.5M dyndom3d [ ]
10.4M electra [ ]
10.4M rasmol [ ]
10.0M mead [ ]
9.5M openmpi [ ]
9.3M entangle [ ]
9.3M phases [ ]
8.2M surfnet [ ]
8.1M pgplot [ ]
8.0M procheck [ ]
7.9M elves [ ]
7.9M particle [ ]
7.3M zdock [ ]
6.4M grace [ ]
6.3M somore [ ]
5.9M nucplot [ ]
5.7M xv [ ]
5.5M amps [ ]
5.4M module [ ]
5.3M nedit [ ]
4.9M vina [ ]
4.8M modelfree [ ]
4.8M mmc [ ]
4.4M a2ps [ ]
4.4M epmr [ ]
4.4M samtools [ ]
4.4M signature [ ]
4.3M aqua [ ]
4.2M xdsi [ ]
3.9M weblogo [ ]
3.9M isthms [ ]
3.8M delphi [ ]
3.8M solvate [ ]
3.7M plotutils [ ]
3.7M bobscript [ ]
3.6M autodock [ ]
3.4M ssaha2 [ ]
3.3M curvesplus [ ]
3.2M pdb-care [ ]
3.2M fftw [ ]
3.1M bcftools [ ]
3.0M aline [ ]
3.0M pales [ ]
3.0M embfactor [ ]
2.8M quilt [ ]
2.7M qushape [ ]
2.5M dssr [ ]
2.4M saxsview [ ]
2.4M profit [ ]
2.3M rnaview [ ]
2.3M diffmap [ ]
2.3M dyndom [ ]
2.2M mammoth-mult [ ]
2.2M plotmtv [ ]
2.2M bfactor [ ]
2.1M concoord [ ]
1.9M xdsstat [ ]
1.9M scc [ ]
1.8M x3d [ ]
1.8M hbplus [ ]
1.7M molphy [ ]
1.6M curves [ ]
1.6M probe [ ]
1.5M primer3 [ ]
1.4M rmerge [ ]
1.2M cpmgfit [ ]
1.1M rmeasure [ ]
1.1M molscript [ ]
1.0M muscle [ ]
878.2K hkl2map [ ]
819.8K best [ ]
723.0K xdscc12 [ ]
683.6K wasp [ ]
622.1K dowser [ ]
597.1K pdbfixer [ ]
527.6K superfold [ ]
522.6K qpack [ ]
483.4K shapemapper [ ]
420.8K surfv [ ]
416.6K samviewer [ ]
396.6K probcons [ ]
380.6K matt [ ]
334.9K tkdiff [ ]
315.3K crop [ ]
298.8K mes [ ]
212.1K amigos2 [ ]
208.5K naccess [ ]
185.1K protskin [ ]
149.8K yup [ ]
122.5K nuccyl [ ]
87.5K surfrace [ ]
63.9K fastmodelfree [ ]
30.6K pipe2xeasy [ ]
102 cython [ ]
100 pandas [ ]
99 numpy [ ]
81 ccpnmr-chembuild [ ]
74 sparx [ ]
73 rcrane [ ]
68 biopython [ ]
68 ipython [ ]
67 pysam [ ]
67 scipy [ ]
65 bioperl [ ]
65 pytz [ ]
57 ebseq [ ]