client_CLI_install.md
... ...
@@ -27,14 +27,14 @@ The SBGrid installation client requires an individual account. To get started, f
27 27
28 28
There is minimal installation needed for these binaries. They can be run from any location. Untar the archive, make the file executable if necessary, and run from your preferred location.
29 29
30
-[Mac : 1.0.518, 2017-05-15](downloads/sbgrid-1.0.518-Darwin.tgz)
30
+[Mac : 1.0.555, 2017-06-21](downloads/sbgrid-1.0.555-Darwin.tgz)
31 31
32
-[Linux : 1.0.518, 2017-05-15](downloads/sbgrid-1.0.518-Linux.tgz)
32
+[Linux : 1.0.555, 2017-06-21](downloads/sbgrid-1.0.555-Linux.tgz)
33 33
34 34
```
35
-$ tar -zxf sbgrid-1.0.518-Darwin.tgz
35
+$ tar -zxf sbgrid-1.0.555-Darwin.tgz
36 36
37
-$ cd sbgrid-1.0.518-Darwin
37
+$ cd sbgrid-1.0.555-Darwin
38 38
39 39
$ ./sbgrid
40 40
usage:
... ...
@@ -71,7 +71,7 @@ sbgrid: error: too few arguments
71 71
## CLI client - Installation and activation
72 72
**1. Download the latest SBGrid installation client from here.**
73 73
74
-[Latest build : 1.0.518, 2017-05-15](downloads/sbgrid-1.0.518-py2-none-any.whl)
74
+[Latest build : 1.0.555, 2017-06-21](downloads/sbgrid-1.0.555-py2-none-any.whl)
75 75
76 76
**2. Install / Upgrade with pip**
77 77
client_install.md
... ...
@@ -28,7 +28,7 @@ Usage info for the GUI and command line clients can be found here : [GUI Usage](
28 28
29 29
**1. Download the latest SBGrid installation client from here.**
30 30
31
- [Latest build : 1.0.518, 2017-05-15](downloads/SBGrid_Installer-1.0.518.dmg)
31
+ [Latest build : 1.0.555, 2017-06-21](downloads/SBGrid_Installer-1.0.555.dmg)
32 32
33 33
**2. Mount the .dmg disk image on your Mac.** Copy the 'SBGrid installer.app' to a convenient location - it does not need to be in /Applications. The .app bundle can be run directly from the mounted dmg image with no installation if desired.
34 34
downloads/SBGrid_Installer-1.0.555.dmg
... ...
Binary files /dev/null and b/downloads/SBGrid_Installer-1.0.555.dmg differ
downloads/sbgrid-1.0.555-Darwin.tgz
... ...
Binary files /dev/null and b/downloads/sbgrid-1.0.555-Darwin.tgz differ
downloads/sbgrid-1.0.555-Linux.tgz
... ...
Binary files /dev/null and b/downloads/sbgrid-1.0.555-Linux.tgz differ
downloads/sbgrid-1.0.555-py2-none-any.whl
... ...
Binary files /dev/null and b/downloads/sbgrid-1.0.555-py2-none-any.whl differ
managing_install.md
... ...
@@ -24,9 +24,9 @@ Software installation and update are initiated from your local server at your si
24 24
### Approximate size per Branch
25 25
| Branch | size |
26 26
| ------------ | ------ |
27
-| i386-mac | 175Gb |
28
-| x86_64-linux | 210Gb |
29
-| shared files | 18Gb |
27
+| i386-mac | 212.8Gb |
28
+| x86_64-linux | 279.9Gb |
29
+| shared files | 9.5Gb |
30 30
31 31
[Size breakdown of titles in a typical installation](size_graph)
32 32
size_graph.md
... ...
@@ -1,196 +1,217 @@
1
-## Size breakdown for a typical SBGrid installation -- 20170202
1
+## Size breakdown for a typical SBGrid installation -- 20170622
2 2
3 3
**Actual packages installed by site vary depending on licensing and requests. Packages can be removed on request.**
4 4
5 5
```
6
-232.9G x86_64-linux [++++++++++++++++++++++++++++++++++++++++++++++]
7
-189.2G i386-mac [+++++++++++++++++++++++++++++++++++++ ]
8
- 18.0G share [+++ ]
6
+279.9G x86_64-linux [+++++++++++++++++++++++++++++++++++++++++++++++++++]
7
+212.8G i386-mac [++++++++++++++++++++++++++++++++++++++ ]
8
+ 9.5G share [+ ]
9 9
```
10 10
11 11
### x86_64-linux ( 232.9G )
12 12
13 13
```
14
-24.5G schrodinger [+++++++++++++++++++++++++++++++++++]
15
-16.6G rosetta [+++++++++++++++++++++++ ]
16
-15.7G phenix [++++++++++++++++++++++ ]
17
-10.5G ccp4 [++++++++++++++ ]
18
-10.1G pomona [++++++++++++++ ]
19
-9.5G system [+++++++++++++ ]
20
-6.7G scipion [+++++++++ ]
21
-6.3G spider [++++++++ ]
22
-6.2G ambertools [++++++++ ]
23
-6.1G coot [++++++++ ]
24
-5.8G orca [++++++++ ]
25
-5.5G ilastik [+++++++ ]
26
-5.3G pyrosetta [+++++++ ]
27
-4.9G anaconda [+++++++ ]
28
-4.8G eman2 [++++++ ]
29
-4.7G divcon [++++++ ]
30
-4.4G dials [++++++ ]
31
-4.2G xplor [+++++ ]
32
-3.9G nmrpipe [+++++ ]
33
-3.7G xmipp [+++++ ]
34
-3.5G molprobity [++++ ]
35
-3.0G ccp4mg [++++ ]
36
-2.8G spring [+++ ]
37
-2.6G dynamo [+++ ]
38
-2.6G relion [+++ ]
39
-2.5G python [+++ ]
40
-2.3G mageckvispr [+++ ]
41
-2.2G atsas [+++ ]
42
-2.2G chimera [+++ ]
43
-2.2G pymol [+++ ]
44
-1.9G blastplus [++ ]
45
-1.7G ccpnmr [++ ]
46
-1.7G rstudio [++ ]
47
-1.6G geneious [++ ]
48
-1.5G peet [++ ]
49
-1.2G r [+ ]
50
-1.2G frealign [+ ]
51
-1.1G csrosetta [+ ]
52
-1.1G arp_warp [+ ]
53
-1.1G buster [+ ]
54
-1.1G imp [+ ]
55
-1.1G iplt [+ ]
56
-1.1G autoproc [+ ]
57
-1.0G cns [+ ]
58
-1.0G bsoft [+ ]
14
+33.4G schrodinger [+++++++++++++++++++++++++++++++++++]
15
+27.6G rosetta [++++++++++++++++++++++++++++ ]
16
+16.1G orca [++++++++++++++++ ]
17
+13.7G phenix [++++++++++++++ ]
18
+11.3G eman2 [+++++++++++ ]
19
+10.1G pomona [++++++++++ ]
20
+ 9.3G ccp4 [+++++++++ ]
21
+ 7.6G scipion [+++++++ ]
22
+ 6.8G ilastik [+++++++ ]
23
+ 6.6G dials [++++++ ]
24
+ 6.3G spider [++++++ ]
25
+ 5.5G ambertools [+++++ ]
26
+ 5.4G coot [+++++ ]
27
+ 5.3G pyrosetta [+++++ ]
28
+ 4.9G anaconda [+++++ ]
29
+ 4.2G texlive [++++ ]
30
+ 4.2G xplor [++++ ]
31
+ 3.9G cuda [++++ ]
32
+ 3.9G nmrpipe [++++ ]
33
+ 3.8G divcon [+++ ]
34
+ 3.7G xmipp [+++ ]
35
+ 3.5G molprobity [+++ ]
36
+ 3.0G ccp4mg [+++ ]
37
+ 2.9G relion [+++ ]
38
+ 2.9G sphire [++ ]
39
+ 2.8G spring [++ ]
40
+ 2.7G python [++ ]
41
+ 2.6G dynamo [++ ]
42
+ 2.3G mageckvispr [++ ]
43
+ 2.1G rstudio [++ ]
44
+ 2.1G geneious [++ ]
45
+ 2.0G cp2k [++ ]
46
+ 2.0G atsas [++ ]
47
+ 2.0G system [++ ]
48
+ 1.8G pymol [+ ]
49
+ 1.7G qt [+ ]
50
+ 1.5G chimera [+ ]
51
+ 1.5G ccpnmr [+ ]
52
+ 1.5G peet [+ ]
53
+ 1.2G r [+ ]
54
+ 1.2G blastplus [+ ]
55
+ 1.1G csrosetta [+ ]
56
+ 1.1G imp [+ ]
57
+ 1.1G iplt [+ ]
58
+ 1.0G cns [+ ]
59 59
998.6M haddock [+ ]
60
-826.3M shiftx2 [+ ]
61
-819.2M emboss [+ ]
62
-807.6M em2em [+ ]
63
-783.1M mgltools [+ ]
64
-719.1M whatif [+ ]
65
-717.9M rcsbtools [+ ]
60
+911.4M arp_warp [ ]
61
+877.5M bsoft [ ]
62
+866.6M autoproc [ ]
63
+826.3M shiftx2 [ ]
64
+819.2M emboss [ ]
65
+815.2M chimerax [ ]
66
+808.4M nmrfam-sparky [ ]
67
+803.5M em2em [ ]
68
+783.1M mgltools [ ]
69
+776.9M buster [ ]
70
+770.3M frealign [ ]
71
+760.2M java [ ]
72
+719.1M whatif [ ]
73
+717.9M rcsbtools [ ]
74
+716.8M vtk [ ]
75
+709.9M dock [ ]
66 76
704.3M gctf [ ]
67 77
702.1M imagic [ ]
78
+614.3M mgltools2 [ ]
68 79
612.8M whatcheck [ ]
69
-599.4M qt [ ]
80
+577.0M relax [ ]
70 81
575.7M vlion [ ]
82
+569.7M icmbrowser [ ]
83
+560.7M mono [ ]
71 84
560.3M fiji [ ]
72
-532.9M imagemagick [ ]
73
-494.4M 3dna [ ]
85
+556.6M imagemagick [ ]
86
+554.9M ultrascan3 [ ]
87
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88
+477.0M focus [ ]
74 89
472.7M caver [ ]
75
-470.3M shelx-2013 [ ]
76 90
442.1M balbes [ ]
77 91
427.7M mrc [ ]
78
-416.9M ultrascan3 [ ]
79
-408.4M gromacs [ ]
80
-405.6M relax [ ]
92
+407.7M gromacs [ ]
81 93
401.7M talosn [ ]
94
+398.1M eman [ ]
82 95
387.0M pdb_redo [ ]
83
-384.7M sphire [ ]
84
-381.8M hkl [ ]
96
+376.8M namd [ ]
85 97
374.6M dtrek_free [ ]
86 98
367.2M vmd [ ]
87
-358.3M imod [ ]
88 99
352.1M motioncorr [ ]
89
-334.9M modeller [ ]
100
+345.9M modeller [ ]
90 101
333.2M 2dx [ ]
102
+325.3M shelx-2013 [ ]
91 103
313.6M gorgon [ ]
104
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92 105
298.2M perl [ ]
93 106
257.6M albula [ ]
94 107
255.5M gerelion [ ]
108
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95 109
251.1M simple [ ]
110
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96 111
235.0M lafire [ ]
112
+232.2M hkl [ ]
97 113
225.9M arcimboldo_lite [ ]
98 114
219.0M mifit [ ]
99 115
215.6M apbs [ ]
116
+214.9M raw [ ]
100 117
210.9M openbabel [ ]
101
-209.4M imagej [ ]
102 118
206.8M solve [ ]
103 119
204.0M cryoemtools [ ]
104 120
192.6M shelx [ ]
105
-190.1M theseus [ ]
106
-188.9M crystfel [ ]
121
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107 122
188.6M caver_analyst [ ]
108 123
186.5M avogadro [ ]
109
-183.7M raw [ ]
124
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125
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110 126
179.5M norma [ ]
111 127
179.4M blast [ ]
112 128
177.5M sassie [ ]
113
-175.3M namd [ ]
114 129
170.0M priism [ ]
115
-169.4M jalview [ ]
116 130
162.8M specview [ ]
117
-154.4M mafft [ ]
131
+157.6M infernal [ ]
118 132
153.6M imod_nma [ ]
119 133
153.3M tigris [ ]
120
-152.7M ctffind4 [ ]
121
-147.9M pytom [ ]
134
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122 135
144.8M tcltk [ ]
123 136
139.8M frodock [ ]
124
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137
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125 138
131.7M aria [ ]
126 139
131.0M spire [ ]
127 140
127.2M fuda [ ]
128 141
126.7M openmm [ ]
129
-123.1M fasta [ ]
130
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131
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142
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143
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144
+119.2M ctffind4 [ ]
132 145
106.4M gamma [ ]
133 146
102.3M breseq [ ]
134 147
100.3M imodfit [ ]
135 148
97.4M prospect [ ]
136 149
96.3M sharp [ ]
137
-95.4M xds [ ]
150
+89.6M igv [ ]
138 151
89.6M urox [ ]
139
-88.6M xdsgui [ ]
140 152
86.8M emip [ ]
153
+86.8M plip [ ]
141 154
85.7M wxpython [ ]
142 155
82.9M powerfit [ ]
156
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143 157
79.5M tcoffee [ ]
144 158
79.1M sparky [ ]
145 159
77.3M vmd-xplor [ ]
146
-76.7M gnuplot [ ]
147
-73.3M cara [ ]
148 160
69.7M ghostscript [ ]
161
+69.5M xdsgui [ ]
149 162
68.5M suprim [ ]
150 163
67.0M protomo [ ]
151 164
66.8M globus_connect_personal [ ]
152 165
66.7M rsref [ ]
153
-65.8M eman [ ]
154
-58.4M scatter [ ]
155
-57.1M mosflm [ ]
166
+65.2M gnuplot [ ]
167
+61.5M imosflm [ ]
168
+58.1M vinalc [ ]
156 169
56.7M pdb2pqr [ ]
157 170
55.7M como [ ]
158 171
55.5M gefrealign [ ]
172
+55.3M scatter [ ]
159 173
54.1M auto3dem [ ]
174
+51.9M cara [ ]
160 175
49.7M sculptor [ ]
176
+49.4M fasta [ ]
161 177
48.3M mag_distortion [ ]
162
-47.9M dock [ ]
163 178
47.5M bnp [ ]
164 179
47.4M dps [ ]
165 180
46.4M unblur [ ]
181
+46.2M hole [ ]
166 182
45.6M ultrascan [ ]
167 183
45.4M saxsview [ ]
168 184
44.0M mmtsb [ ]
185
+43.7M mosflm [ ]
169 186
42.1M ruby [ ]
170 187
42.1M gerard [ ]
171 188
41.7M resmap [ ]
172
-40.7M simulaid [ ]
173 189
40.3M refmac [ ]
174 190
40.0M nmrview [ ]
175 191
39.5M staden [ ]
176 192
35.8M mead [ ]
177 193
34.1M graphviz [ ]
194
+33.8M xdrawchem [ ]
178 195
33.0M appion [ ]
179 196
30.7M stamp [ ]
180 197
30.3M pymmlib [ ]
181 198
29.9M profphd [ ]
182 199
29.5M fpocket [ ]
183 200
29.5M eden [ ]
201
+29.2M ringer [ ]
202
+28.5M pdb_extract [ ]
184 203
28.3M procheck [ ]
185
-28.1M ringer [ ]
186 204
27.9M sam [ ]
187 205
27.2M phases [ ]
206
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188 207
26.5M scwrl3 [ ]
189 208
26.1M summovie [ ]
190 209
25.6M miso [ ]
191
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192 210
25.0M rasmol [ ]
193 211
23.2M ihrsr [ ]
212
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213
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214
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194 215
22.1M r2r [ ]
195 216
21.7M nessy [ ]
196 217
21.6M finddqe [ ]
... ...
@@ -200,135 +221,137 @@
200 221
21.3M gwyddion [ ]
201 222
20.1M wattos [ ]
202 223
20.1M rdock [ ]
224
+20.1M mpich [ ]
203 225
19.7M bbhp [ ]
204 226
19.3M concoord [ ]
205
-18.4M hole [ ]
206 227
18.2M clustal [ ]
207 228
18.2M rsref2000 [ ]
208 229
17.7M escet [ ]
209
-17.7M adxv [ ]
210 230
17.6M phylip [ ]
211 231
17.4M cmview [ ]
212 232
17.2M replace [ ]
233
+17.2M ctf [ ]
213 234
17.1M direx [ ]
214 235
17.0M mole [ ]
215 236
16.5M redcat [ ]
237
+16.4M sbgrid_installer [ ]
216 238
16.3M remediator [ ]
217 239
16.2M molmol [ ]
218 240
16.0M mrtailor [ ]
219
-15.5M xdrawchem [ ]
220 241
15.5M dssp [ ]
221 242
15.3M ligplus [ ]
222 243
15.2M knuspr [ ]
223 244
15.2M gautomatch [ ]
224 245
15.0M main [ ]
225
-14.5M situs [ ]
226 246
14.2M promals [ ]
227 247
14.1M xeasy [ ]
228
-13.6M epmr [ ]
229 248
13.4M assemble2 [ ]
230 249
13.4M o [ ]
231 250
13.2M rnamlview [ ]
232 251
13.2M xdsme [ ]
252
+13.2M adxv [ ]
233 253
12.7M povray [ ]
234 254
12.5M pft3dr [ ]
235 255
11.9M phoelix [ ]
236 256
11.7M mcce [ ]
237 257
11.6M modelfree [ ]
258
+11.5M situs [ ]
259
+11.4M tensor [ ]
238 260
11.4M particle [ ]
239 261
11.4M finchtv [ ]
240
-11.3M tensor [ ]
241
-10.8M samtools [ ]
242 262
10.7M frealix [ ]
243 263
10.5M hydropro [ ]
244 264
10.5M dyndom3d [ ]
245 265
10.0M x3d [ ]
246
-9.9M espript [ ]
247
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248
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249
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250
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251
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252
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253
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254
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255
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256
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257
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258
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259
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260
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261
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262
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263
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264
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265
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266
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267
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268
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269
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270
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271
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272
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273
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274
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275
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276
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277
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278
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279
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280
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281
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282
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283
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284
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285
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286
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287
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288
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289
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290
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291
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292
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293
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294
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295
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296
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297
-2.1M bfactor [ ]
298
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299
-2.0M surfv [ ]
300
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301
-2.0M pales [ ]
302
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303
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304
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305
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306
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307
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308
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309
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310
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311
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312
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313
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314
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315
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316
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317
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318
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319
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320
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321
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322
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323
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266
+ 9.9M espript [ ]
267
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268
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269
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270
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271
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272
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273
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274
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275
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276
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277
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278
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279
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280
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281
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282
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283
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284
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285
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286
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287
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288
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289
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290
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291
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292
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293
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294
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295
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296
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297
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298
+ 4.1M zdock [ ]
299
+ 4.0M vina [ ]
300
+ 3.8M solvate [ ]
301
+ 3.6M nedit [ ]
302
+ 3.6M ace2 [ ]
303
+ 3.6M xdsstat [ ]
304
+ 3.3M ssaha2 [ ]
305
+ 3.3M mmc [ ]
306
+ 3.2M h5toxds [ ]
307
+ 3.2M dyndom [ ]
308
+ 3.2M xdscc12 [ ]
309
+ 3.1M scc [ ]
310
+ 3.1M pdbstat [ ]
311
+ 3.1M superfold [ ]
312
+ 2.7M qushape [ ]
313
+ 2.6M signature [ ]
314
+ 2.6M aline [ ]
315
+ 2.5M alscript [ ]
316
+ 2.5M mammoth-mult [ ]
317
+ 2.5M primer3 [ ]
318
+ 2.4M tiltpicker [ ]
319
+ 2.4M dssr [ ]
320
+ 2.1M dogpicker [ ]
321
+ 2.1M bfactor [ ]
322
+ 2.0M hbplus [ ]
323
+ 2.0M surfv [ ]
324
+ 2.0M plotmtv [ ]
325
+ 2.0M pales [ ]
326
+ 1.9M quilt [ ]
327
+ 1.9M diffmap [ ]
328
+ 1.8M crop [ ]
329
+ 1.8M pdbfixer [ ]
330
+ 1.7M bin2mrc [ ]
331
+ 1.7M rnaview [ ]
332
+ 1.6M best [ ]
333
+ 1.6M molscript [ ]
334
+ 1.5M wasp [ ]
335
+ 1.5M xds-viewer [ ]
336
+ 1.5M madbend [ ]
337
+ 1.4M curves [ ]
338
+ 1.4M reduce [ ]
339
+ 1.3M autodock [ ]
340
+ 1.3M probe [ ]
341
+ 1.3M randomize [ ]
342
+ 1.2M untangle [ ]
343
+ 1.2M raspnmr [ ]
344
+ 1.2M cpmgfit [ ]
345
+ 1.0M muscle [ ]
346
+995.9K hkl2map [ ]
324 347
992.2K surfnet [ ]
325 348
990.8K pdb-care [ ]
326
-926.8K hkl2map [ ]
327 349
911.1K rmerge [ ]
328 350
895.0K ligplot [ ]
329 351
891.9K naccess [ ]
330 352
821.0K hydronmr [ ]
331 353
738.2K dowser [ ]
354
+648.1K rnaframework [ ]
332 355
641.8K bobscript [ ]
333 356
635.8K rmeasure [ ]
334 357
582.8K molphy [ ]
... ...
@@ -348,191 +371,208 @@
348 371
76.0K surfrace [ ]
349 372
63.9K fastmodelfree [ ]
350 373
23.7K pipe2xeasy [ ]
351
-2.3K clustal-omega [ ]
352
- 109 pandas [ ]
353
- 108 numpy [ ]
354
- 107 pysam [ ]
355
- 106 pytz [ ]
356
- 95 rcrane [ ]
357
- 85 ccpnmr-chembuild [ ]
358
- 82 sparx [ ]
359
- 74 biopython [ ]
360
- 72 ipython [ ]
361
- 70 scipy [ ]
362
- 61 ebseq [ ]
363
- 34 bioperl [ ]
374
+ 2.3K clustal-omega [ ]
375
+ 109 pandas [ ]
376
+ 108 numpy [ ]
377
+ 107 pysam [ ]
378
+ 106 pytz [ ]
379
+ 95 rcrane [ ]
380
+ 85 ccpnmr-chembuild [ ]
381
+ 82 sparx [ ]
382
+ 77 mdanalysis [ ]
383
+ 74 biopython [ ]
384
+ 73 neggia [ ]
385
+ 72 ipython [ ]
386
+ 70 scipy [ ]
387
+ 61 ebseq [ ]
388
+ 34 bioperl [ ]
364 389
```
365 390
366 391
### i386-mac ( 189.2G )
367 392
368 393
```
369
-25.8G schrodinger [+++++++++++++++++++++++++++++++++++++]
370
-13.0G rosetta [++++++++++++++++++ ]
371
-11.4G phenix [++++++++++++++++ ]
372
-9.6G pomona [+++++++++++++ ]
373
-9.2G ccp4 [+++++++++++++ ]
374
-8.8G pyrosetta [++++++++++++ ]
375
-6.0G ambertools [++++++++ ]
376
-5.3G orca [+++++++ ]
377
-4.9G spring [+++++++ ]
378
-4.1G ilastik [+++++ ]
379
-3.8G anaconda [+++++ ]
380
-3.8G spider [+++++ ]
381
-3.5G python [+++++ ]
382
-3.4G csrosetta [++++ ]
383
-3.3G dials [++++ ]
384
-3.3G pymol [++++ ]
385
-3.2G molprobity [++++ ]
386
-3.1G xmipp [++++ ]
387
-2.8G nmrpipe [++++ ]
388
-2.7G blastplus [+++ ]
389
-2.6G system [+++ ]
390
-2.5G ccp4mg [+++ ]
391
-2.5G atsas [+++ ]
392
-2.4G divcon [+++ ]
393
-2.4G xplor [+++ ]
394
-2.3G chimera [+++ ]
395
-2.0G eman2 [++ ]
396
-1.6G mageckvispr [++ ]
397
-1.6G relax [++ ]
398
-1.5G ccpnmr [++ ]
399
-1.4G geneious [+ ]
400
-1.2G r [+ ]
401
-1.2G arp_warp [+ ]
402
-1.2G coot [+ ]
403
-1.1G cns [+ ]
404
-1.1G whatcheck [+ ]
394
+34.6G schrodinger [+++++++++++++++++++++++++++++++++++++]
395
+20.5G rosetta [+++++++++++++++++++++ ]
396
+12.6G phenix [+++++++++++++ ]
397
+ 9.6G pomona [++++++++++ ]
398
+ 8.8G pyrosetta [+++++++++ ]
399
+ 7.6G ccp4 [++++++++ ]
400
+ 5.4G ambertools [+++++ ]
401
+ 5.3G orca [+++++ ]
402
+ 5.2G ilastik [+++++ ]
403
+ 4.9G dials [+++++ ]
404
+ 4.9G spring [+++++ ]
405
+ 4.2G texlive [++++ ]
406
+ 4.0G eman2 [++++ ]
407
+ 3.8G anaconda [++++ ]
408
+ 3.8G spider [++++ ]
409
+ 3.5G python [+++ ]
410
+ 3.5G atsas [+++ ]
411
+ 3.4G csrosetta [+++ ]
412
+ 3.2G molprobity [+++ ]
413
+ 3.1G xmipp [+++ ]
414
+ 2.8G nmrpipe [++ ]
415
+ 2.5G ccp4mg [++ ]
416
+ 2.4G divcon [++ ]
417
+ 2.4G xplor [++ ]
418
+ 2.1G relax [++ ]
419
+ 2.0G chimera [++ ]
420
+ 1.9G geneious [++ ]
421
+ 1.6G mageckvispr [+ ]
422
+ 1.2G r [+ ]
423
+ 1.2G coot [+ ]
424
+ 1.1G pymol [+ ]
425
+ 1.1G cns [+ ]
426
+ 1.1G nmrfam-sparky [+ ]
427
+ 1.1G whatcheck [+ ]
428
+ 1.1G qt [+ ]
429
+ 1.1G blastplus [+ ]
430
+ 1.0G ccpnmr [+ ]
431
+ 1.0G arp_warp [+ ]
405 432
1003.1M imp [+ ]
406 433
990.7M shiftx2 [+ ]
407
-906.3M iplt [+ ]
408
-888.3M 2dx [+ ]
409
-862.8M mgltools [+ ]
410
-843.5M emboss [+ ]
411
-805.5M rcsbtools [+ ]
412
-802.7M em2em [+ ]
413
-784.7M buster [+ ]
434
+906.3M iplt [ ]
435
+899.1M system [ ]
436
+888.3M 2dx [ ]
437
+843.5M emboss [ ]
438
+805.5M rcsbtools [ ]
439
+797.0M em2em [ ]
440
+734.2M relion [ ]
414 441
705.1M specview [ ]
442
+694.7M focus [ ]
415 443
693.3M rstudio [ ]
416
-565.4M frealign [ ]
417
-555.9M modeller [ ]
418
-552.2M bsoft [ ]
419
-534.1M imod [ ]
420
-503.0M blast [ ]
444
+659.5M buster [ ]
445
+629.9M simple [ ]
446
+623.3M imod [ ]
447
+523.1M chimerax [ ]
421 448
499.2M ultrascan3 [ ]
422
-496.2M 3dna [ ]
423 449
483.4M solve [ ]
424 450
481.2M gwyddion [ ]
425
-473.0M autoproc [ ]
426 451
472.7M caver [ ]
427
-466.7M gromacs [ ]
452
+467.8M icmbrowser [ ]
453
+465.2M mgltools [ ]
428 454
463.5M fiji [ ]
429 455
455.4M gorgon [ ]
456
+453.6M raw [ ]
430 457
452.4M balbes [ ]
431
-437.3M relion [ ]
458
+433.6M bsoft [ ]
459
+433.3M autoproc [ ]
460
+431.0M frealign [ ]
432 461
428.3M dynamo [ ]
462
+410.1M blast [ ]
433 463
395.1M talosn [ ]
464
+384.0M modeller [ ]
434 465
379.9M pymmlib [ ]
435
-372.0M hkl [ ]
466
+361.2M theseus [ ]
436 467
353.8M dssp [ ]
437
-335.7M imosflm [ ]
438
-330.9M qt [ ]
439 468
323.8M mrc [ ]
440 469
305.2M ultrascan [ ]
441
-296.9M simple [ ]
470
+293.0M mgltools2 [ ]
442 471
274.7M albula [ ]
443 472
273.7M avogadro [ ]
444
-254.0M imagemagick [ ]
445
-236.1M shelx-2013 [ ]
473
+247.0M 3dna [ ]
474
+234.3M cp2k [ ]
475
+227.9M gromacs [ ]
446 476
227.4M lafire [ ]
477
+216.4M unio [ ]
447 478
213.8M eman [ ]
448 479
205.7M vmd [ ]
449
-204.7M mafft [ ]
480
+201.3M hkl [ ]
450 481
200.6M caver_analyst [ ]
482
+197.5M dock [ ]
451 483
196.0M cryoemtools [ ]
452
-193.6M theseus [ ]
453
-193.0M raw [ ]
484
+191.2M mono [ ]
454 485
187.9M spdbv [ ]
455 486
186.5M perl [ ]
487
+185.1M imagej [ ]
456 488
182.9M dtrek_free [ ]
457
-171.6M rnastructure [ ]
489
+171.7M rnastructure [ ]
458 490
170.4M auto3dem [ ]
459 491
164.8M apbs [ ]
460 492
164.6M spire [ ]
493
+162.3M shelx-2013 [ ]
494
+161.6M sratoolkit [ ]
461 495
158.4M tcltk [ ]
496
+153.7M imosflm [ ]
462 497
151.4M igv [ ]
463 498
146.0M tigris [ ]
464 499
145.3M sparky [ ]
465
-143.8M unio [ ]
466 500
131.3M shelx [ ]
467 501
131.1M nmrview [ ]
468 502
129.6M priism [ ]
469
-125.6M crystfel [ ]
470
-123.9M mosflm [ ]
503
+127.4M imagemagick [ ]
504
+126.8M mafft [ ]
471 505
120.8M openmm [ ]
472 506
120.3M refmac [ ]
473
-119.9M jalview [ ]
507
+114.5M xds [ ]
474 508
111.5M breseq [ ]
475 509
111.0M sharp [ ]
476 510
107.2M clustal [ ]
477
-105.5M xdsgui [ ]
478
-104.8M dock [ ]
479
-102.2M fasta [ ]
480 511
102.0M ghostscript [ ]
481 512
100.9M gamma [ ]
513
+98.9M mosflm [ ]
514
+96.3M crystfel [ ]
515
+94.3M bowtie2 [ ]
482 516
91.5M tcoffee [ ]
483
-90.2M xds [ ]
484 517
90.0M graphviz [ ]
518
+87.6M infernal [ ]
519
+83.1M xdsgui [ ]
485 520
82.4M powerfit [ ]
521
+78.2M jalview [ ]
486 522
77.2M vmd-xplor [ ]
487 523
74.3M wxpython [ ]
524
+69.4M pytom [ ]
488 525
63.3M raspnmr [ ]
489 526
63.1M gerard [ ]
490 527
62.2M bbhp [ ]
491 528
58.8M sculptor [ ]
492
-58.5M pytom [ ]
493
-58.4M scatter [ ]
529
+56.6M xrayview [ ]
494 530
56.0M como [ ]
495
-55.1M ctffind4 [ ]
531
+55.3M scatter [ ]
496 532
54.8M emip [ ]
533
+53.5M sbgrid_installer [ ]
497 534
53.4M namd [ ]
498 535
51.4M finchtv [ ]
499 536
50.6M pdb2pqr [ ]
500 537
49.8M openbabel [ ]
501 538
48.5M openmotif [ ]
502 539
46.8M staden [ ]
540
+46.7M fasta [ ]
503 541
44.2M mmtsb [ ]
504 542
43.6M suprim [ ]
505 543
43.5M lib [ ]
506 544
42.9M ligplot [ ]
545
+39.5M ctffind4 [ ]
507 546
37.8M phoelix [ ]
508
-37.4M simulaid [ ]
509 547
35.6M profphd [ ]
510 548
34.8M haddock [ ]
511 549
34.3M main [ ]
512
-33.7M adxv [ ]
513 550
33.4M sam [ ]
514
-32.9M xrayview [ ]
515 551
31.5M cara [ ]
516 552
31.4M aria [ ]
517 553
31.3M scwrl4 [ ]
518 554
31.0M knuspr [ ]
519
-30.5M situs [ ]
555
+30.3M o [ ]
556
+29.7M mpich [ ]
520 557
29.2M stamp [ ]
521 558
29.2M ruby [ ]
522 559
29.1M pdb_redo [ ]
560
+29.0M hole [ ]
561
+28.9M pdb_extract [ ]
523 562
28.1M ringer [ ]
524 563
27.0M fpocket [ ]
564
+26.4M simulaid [ ]
525 565
26.2M pft3dr [ ]
526
-25.8M o [ ]
527 566
25.5M globus_connect_personal [ ]
528 567
24.5M imodfit [ ]
529 568
24.4M phylip [ ]
530 569
24.0M raster3d [ ]
531
-22.6M gnuplot [ ]
570
+22.8M adxv [ ]
532 571
21.9M molmol [ ]
572
+21.0M eiger2cbf [ ]
533 573
20.5M appion [ ]
534 574
20.4M ace2 [ ]
535
-19.7M imagej [ ]
575
+20.1M situs [ ]
536 576
19.6M direx [ ]
537 577
19.2M promals [ ]
538 578
18.9M resmap [ ]
... ...
@@ -540,7 +580,6 @@
540 580
18.3M ligplus [ ]
541 581
18.3M miso [ ]
542 582
17.9M xds-viewer [ ]
543
-17.9M ctf [ ]
544 583
17.4M cmview [ ]
545 584
17.1M mole [ ]
546 585
16.9M redcat [ ]
... ...
@@ -549,6 +588,7 @@
549 588
16.3M remediator [ ]
550 589
15.5M mrtailor [ ]
551 590
15.4M replace [ ]
591
+13.6M gnuplot [ ]
552 592
13.4M assemble2 [ ]
553 593
13.3M netblast [ ]
554 594
13.2M xdsme [ ]
... ...
@@ -556,91 +596,92 @@
556 596
12.8M povray [ ]
557 597
12.7M mcce [ ]
558 598
12.7M reduce [ ]
559
-12.5M mpich [ ]
560
-11.2M hole [ ]
561 599
11.2M tensor [ ]
562 600
10.9M espript [ ]
563 601
10.9M nessy [ ]
602
+10.6M samtools [ ]
564 603
10.6M dino [ ]
565 604
10.5M dyndom3d [ ]
566 605
10.4M electra [ ]
567 606
10.4M rasmol [ ]
568 607
10.0M mead [ ]
569
-9.5M openmpi [ ]
570
-9.3M entangle [ ]
571
-9.3M phases [ ]
572
-8.2M surfnet [ ]
573
-8.1M pgplot [ ]
574
-8.0M procheck [ ]
575
-7.9M elves [ ]
576
-7.9M particle [ ]
577
-7.3M zdock [ ]
578
-6.4M grace [ ]
579
-6.3M somore [ ]
580
-5.9M nucplot [ ]
581
-5.7M xv [ ]
582
-5.5M amps [ ]
583
-5.4M module [ ]
584
-5.3M nedit [ ]
585
-4.9M vina [ ]
586
-4.8M modelfree [ ]
587
-4.8M mmc [ ]
588
-4.4M a2ps [ ]
589
-4.4M epmr [ ]
590
-4.4M samtools [ ]
591
-4.4M signature [ ]
592
-4.3M aqua [ ]
593
-4.2M xdsi [ ]
594
-3.9M weblogo [ ]
595
-3.9M isthms [ ]
596
-3.8M delphi [ ]
597
-3.8M solvate [ ]
598
-3.7M plotutils [ ]
599
-3.7M bobscript [ ]
600
-3.6M autodock [ ]
601
-3.4M ssaha2 [ ]
602
-3.3M curvesplus [ ]
603
-3.2M pdb-care [ ]
604
-3.2M fftw [ ]
605
-3.1M bcftools [ ]
606
-3.0M aline [ ]
607
-3.0M pales [ ]
608
-3.0M embfactor [ ]
609
-2.8M quilt [ ]
610
-2.7M qushape [ ]
611
-2.5M dssr [ ]
612
-2.4M saxsview [ ]
613
-2.4M profit [ ]
614
-2.3M rnaview [ ]
615
-2.3M diffmap [ ]
616
-2.3M dyndom [ ]
617
-2.2M mammoth-mult [ ]
618
-2.2M plotmtv [ ]
619
-2.2M bfactor [ ]
620
-2.1M concoord [ ]
621
-1.9M xdsstat [ ]
622
-1.9M scc [ ]
623
-1.8M x3d [ ]
624
-1.8M hbplus [ ]
625
-1.7M molphy [ ]
626
-1.6M curves [ ]
627
-1.6M probe [ ]
628
-1.5M primer3 [ ]
629
-1.4M rmerge [ ]
630
-1.2M cpmgfit [ ]
631
-1.1M rmeasure [ ]
632
-1.1M molscript [ ]
633
-1.0M timescapes [ ]
634
-1.0M muscle [ ]
635
-878.2K hkl2map [ ]
608
+ 9.5M openmpi [ ]
609
+ 9.3M entangle [ ]
610
+ 9.3M phases [ ]
611
+ 8.4M ctf [ ]
612
+ 8.2M surfnet [ ]
613
+ 8.1M pgplot [ ]
614
+ 8.0M procheck [ ]
615
+ 7.9M elves [ ]
616
+ 7.9M particle [ ]
617
+ 7.3M zdock [ ]
618
+ 6.5M bioptools [ ]
619
+ 6.4M grace [ ]
620
+ 6.3M somore [ ]
621
+ 5.9M nucplot [ ]
622
+ 5.7M xv [ ]
623
+ 5.5M amps [ ]
624
+ 5.3M nedit [ ]
625
+ 4.9M vina [ ]
626
+ 4.8M modelfree [ ]
627
+ 4.8M mmc [ ]
628
+ 4.7M xdsapp [ ]
629
+ 4.4M a2ps [ ]
630
+ 4.4M signature [ ]
631
+ 4.3M aqua [ ]
632
+ 4.2M xdsi [ ]
633
+ 3.9M weblogo [ ]
634
+ 3.9M isthms [ ]
635
+ 3.8M delphi [ ]
636
+ 3.8M solvate [ ]
637
+ 3.7M plotutils [ ]
638
+ 3.7M bobscript [ ]
639
+ 3.6M autodock [ ]
640
+ 3.4M ssaha2 [ ]
641
+ 3.3M curvesplus [ ]
642
+ 3.2M pdb-care [ ]
643
+ 3.2M fftw [ ]
644
+ 3.1M bcftools [ ]
645
+ 3.0M aline [ ]
646
+ 3.0M pales [ ]
647
+ 3.0M embfactor [ ]
648
+ 2.8M quilt [ ]
649
+ 2.7M qushape [ ]
650
+ 2.6M dssr [ ]
651
+ 2.4M saxsview [ ]
652
+ 2.4M profit [ ]
653
+ 2.3M rnaview [ ]
654
+ 2.3M diffmap [ ]
655
+ 2.3M dyndom [ ]
656
+ 2.2M mammoth-mult [ ]
657
+ 2.2M plotmtv [ ]
658
+ 2.2M bfactor [ ]
659
+ 2.1M concoord [ ]
660
+ 1.9M xdsstat [ ]
661
+ 1.9M scc [ ]
662
+ 1.8M x3d [ ]
663
+ 1.8M hbplus [ ]
664
+ 1.7M epmr [ ]
665
+ 1.7M molphy [ ]
666
+ 1.6M curves [ ]
667
+ 1.6M probe [ ]
668
+ 1.5M primer3 [ ]
669
+ 1.4M rmerge [ ]
670
+ 1.4M xdscc12 [ ]
671
+ 1.2M cpmgfit [ ]
672
+ 1.1M rmeasure [ ]
673
+ 1.1M molscript [ ]
674
+ 1.0M timescapes [ ]
675
+ 1.0M muscle [ ]
636 676
819.8K best [ ]
637
-723.0K xdscc12 [ ]
677
+808.5K hkl2map [ ]
638 678
683.6K wasp [ ]
639 679
622.1K dowser [ ]
640 680
597.1K pdbfixer [ ]
641 681
527.6K superfold [ ]
642 682
522.6K qpack [ ]
643 683
483.4K shapemapper [ ]
684
+463.4K rnaframework [ ]
644 685
420.8K surfv [ ]
645 686
416.6K samviewer [ ]
646 687
396.6K probcons [ ]
... ...
@@ -657,51 +698,53 @@
657 698
87.5K surfrace [ ]
658 699
63.9K fastmodelfree [ ]
659 700
30.6K pipe2xeasy [ ]
660
- 102 cython [ ]
661
- 100 pandas [ ]
662
- 99 numpy [ ]
663
- 81 ccpnmr-chembuild [ ]
664
- 74 sparx [ ]
665
- 73 rcrane [ ]
666
- 68 biopython [ ]
667
- 68 ipython [ ]
668
- 67 pysam [ ]
669
- 67 scipy [ ]
670
- 65 bioperl [ ]
671
- 65 pytz [ ]
672
- 57 ebseq [ ]
701
+ 102 cython [ ]
702
+ 100 pandas [ ]
703
+ 99 numpy [ ]
704
+ 81 ccpnmr-chembuild [ ]
705
+ 74 sparx [ ]
706
+ 73 mdanalysis [ ]
707
+ 73 rcrane [ ]
708
+ 69 neggia [ ]
709
+ 68 biopython [ ]
710
+ 68 ipython [ ]
711
+ 67 pysam [ ]
712
+ 67 scipy [ ]
713
+ 65 bioperl [ ]
714
+ 65 pytz [ ]
715
+ 57 ebseq [ ]
673 716
```
674 717
675 718
### share ( 18.0G )
676 719
677 720
```
678
-7.7G balbes [++++++++++++++++++++++++++++++++++++++++++++++++++++++]
679
-5.8G rosetta [++++++++++++++++++++++++++++++++++++++++ ]
680
-990.7M pymol [++++++ ]
681
-714.7M gerard [++++ ]
682
-569.8M spider [+++ ]
683
-449.0M ligplus [+++ ]
684
-418.7M emip [++ ]
685
-330.8M refmac [++ ]
686
-254.1M o [+ ]
687
-227.0M coot [+ ]
688
-216.9M caver [+ ]
721
+5.1G balbes [++++++++++++++++++++++++++++++++++++++++++++++++++++++]
722
+990.7M pymol [++++++++++ ]
723
+714.7M gerard [+++++++ ]
724
+569.8M spider [+++++ ]
725
+449.0M ligplus [++++ ]
726
+418.7M emip [++++ ]
727
+330.8M refmac [+++ ]
728
+260.9M o [++ ]
729
+227.0M coot [++ ]
730
+216.9M caver [++ ]
689 731
192.7M whatcheck [+ ]
690
-119.6M hkl [ ]
691 732
78.0M reduce [ ]
692
-46.8M imagej [ ]
733
+25.1M imagej [ ]
693 734
23.1M fiji [ ]
694 735
8.4M system [ ]
695 736
6.1M ghostscript [ ]
696 737
1.8M blast [ ]
697 738
368.6K simulaid [ ]
698
-310.6K sbgrid [ ]
739
+285.3K sbgrid [ ]
699 740
258.5K adxv [ ]
700 741
198.9K emboss [ ]
701
-189.3K capsules [ ]
742
+196.8K capsules [ ]
702 743
132.6K xds [ ]
703 744
128.9K sam [ ]
704
-100.1K bin [ ]
745
+104.6K bin [ ]
746
+67.7K grids [ ]
705 747
49.0K cns [ ]
706 748
50 pyrosetta [ ]
749
+ 8 rosetta [ ]
707 750
```
usage/client_CLI_install.md
... ...
@@ -2,6 +2,8 @@
2 2
3 3
The SBGrid software stack can be installed using our CLI (command line interface) installation client for [Linux (CentOS/RHEL 6 or 7 recommended) or Apple OSX computers running MacOSX v10.9 - 10.12.](operatingsystems)
4 4
5
+Three software installers are available. Binary releases are available for MacOS and CentOS7/Ubuntu operating systems. A python release is also provided which is compatible with Mac and most Linux (CentOS6 and higher) operating systems.
6
+
5 7
The SBGrid installation client requires an individual account. To get started, first, set up an account by registering here : [SBGrid registration](https://sbgrid.org/registration/register/)
6 8
7 9
### Pre-installation requirements
... ...
@@ -21,20 +23,55 @@ The SBGrid installation client requires an individual account. To get started, f
21 23
**pip**
22 24
pip is a package management system used to install and manage software packages written in Python. The software installation client is installable by pip. This may not be on you machine by default, instructions for adding it are included here.
23 25
24
-### pip - Mac Installation
26
+### Binary releases : MacOS and Linux Installation
27
+
28
+There is minimal installation needed for these binaries. They can be run from any location. Untar the archive, make the file executable if necessary, and run from your preferred location.
29
+
30
+[Mac : 1.0.555, 2017-06-21](downloads/sbgrid-1.0.555-Darwin.tgz)
31
+
32
+[Linux : 1.0.555, 2017-06-21](downloads/sbgrid-1.0.555-Linux.tgz)
33
+
34
+```
35
+$ tar -zxf sbgrid-1.0.555-Darwin.tgz
36
+
37
+$ cd sbgrid-1.0.555-Darwin
38
+
39
+$ ./sbgrid
40
+usage:
41
+sbgrid <command> [<command_args>]
42
+
43
+Available commands are:
44
+ activate activate new installation
45
+ grids list available grids
46
+ info print package metadata
47
+ install install single package
48
+ install-all install all packages from collection
49
+ installed list installed packages
50
+ list list available packages
51
+ rebuild rebuild installation
52
+ remove remove installed package
53
+ resume resume interrupted installations
54
+ update update package to latest release/version
55
+ update-all update all packages to latest release/version
56
+ updates list available updates for installed packages
57
+ version print package version string
58
+sbgrid: error: too few arguments
59
+```
60
+
61
+### Install python wheel using **pip** - Mac Installation
25 62
26 63
On mac, pip is available from [macports](https://www.macports.org/), [homebrew](http://brew.sh/), and [fink](http://finkproject.org/). It also can be added using **easy_install**. easy_install will install pip into your system python.
27 64
28 65
$ sudo easy_install pip
29 66
30
-### pip - Linux Installation
67
+### Install python wheel using **pip** - Linux Installation
31 68
32 69
On CentOS6, you can install pip from the EPEL repository (yum -y install python-pip) or as [per these directions](https://pip.pypa.io/en/stable/installing/)
33 70
34 71
## CLI client - Installation and activation
35 72
**1. Download the latest SBGrid installation client from here.**
36 73
37
-[Latest build : 1.0.471, 2017-02-17](downloads/archive/SBGrid_Installer-1.0.471-py2-none-any.whl)
74
+[Latest build : 1.0.555, 2017-06-21](downloads/sbgrid-1.0.555-py2-none-any.whl)
38 75
39 76
**2. Install / Upgrade with pip**
40 77
usage/client_install.md
... ...
@@ -28,7 +28,7 @@ Usage info for the GUI and command line clients can be found here : [GUI Usage](
28 28
29 29
**1. Download the latest SBGrid installation client from here.**
30 30
31
- [Latest build : 1.0.506, 2017-04-21](downloads/SBGrid_Installer-1.0.506.dmg)
31
+ [Latest build : 1.0.518, 2017-05-15](downloads/SBGrid_Installer-1.0.518.dmg)
32 32
33 33
**2. Mount the .dmg disk image on your Mac.** Copy the 'SBGrid installer.app' to a convenient location - it does not need to be in /Applications. The .app bundle can be run directly from the mounted dmg image with no installation if desired.
34 34
usage/versions.md
... ...
@@ -7,7 +7,7 @@ Most of the software titles installed in the SBGrid software collection have sev
7 7
To list the available versions of a software title, you can use the *sbgrid* utility. Running *sbgrid -l* will list the versions for your current platform. From a Linux machine, a search for CCP4 versions looks like this:
8 8
9 9
10
- $ sbgrid -l ccp4
10
+ $ sbgrid-info -l ccp4
11 11
Version information for: /programs/x86_64-linux/ccp4
12 12
13 13
Default version: 7.0
... ...
@@ -16,10 +16,10 @@ To list the available versions of a software title, you can use the *sbgrid* uti
16 16
Overrides use this shell variable: CCP4_X
17 17
18 18
19
-Running *sbgrid -L* will print the available versions for the three current platforms (OS X PowerPC and Intel, Linux).
19
+Running *sbgrid-info -L* will print the available versions for the three current platforms (OS X PowerPC and Intel, Linux).
20 20
21 21
22
- $ sbgrid -L gnuplot
22
+ $ sbgrid-info -L gnuplot
23 23
Version information for: /programs/x86_64-linux/gnuplot
24 24
25 25
Default version: 4.6.4
versions.md
... ...
@@ -7,7 +7,7 @@ Most of the software titles installed in the SBGrid software collection have sev
7 7
To list the available versions of a software title, you can use the *sbgrid* utility. Running *sbgrid -l* will list the versions for your current platform. From a Linux machine, a search for CCP4 versions looks like this:
8 8
9 9
10
- $ sbgrid -l ccp4
10
+ $ sbgrid-info -l ccp4
11 11
Version information for: /programs/x86_64-linux/ccp4
12 12
13 13
Default version: 7.0
... ...
@@ -16,10 +16,10 @@ To list the available versions of a software title, you can use the *sbgrid* uti
16 16
Overrides use this shell variable: CCP4_X
17 17
18 18
19
-Running *sbgrid -L* will print the available versions for the three current platforms (OS X PowerPC and Intel, Linux).
19
+Running *sbgrid-info -L* will print the available versions for the three current platforms (OS X PowerPC and Intel, Linux).
20 20
21 21
22
- $ sbgrid -L gnuplot
22
+ $ sbgrid-info -L gnuplot
23 23
Version information for: /programs/x86_64-linux/gnuplot
24 24
25 25
Default version: 4.6.4