coot.md
... ...
@@ -46,11 +46,48 @@ $ coot --sbapp:l
46 46
47 47
The executable `coot` is present in the titles **ccp4, ccpem, and coot**.
48 48
49
+To see all the titles with details use `--sbapp:L`
50
+
51
+```
52
+$ coot --sbapp:L
53
+
54
+ Titles containing coot
55
+ Title 1 of 3: Version information for: /programs/x86_64-linux/ccp4
56
+
57
+Default version: 7.1
58
+In-use version: 7.1
59
+
60
+Installed versions: 7.1 7.1.006 7.0 7.0.078 6.3.0
61
+Other available versions: 7.1.006 7.0 7.0.078 6.3.0
62
+Overrides use this shell variable: CCP4_X
63
+
64
+ Title 2 of 3: Version information for: /programs/x86_64-linux/ccpem
65
+
66
+Default version: 1.4.1
67
+In-use version: 1.4.1
68
+
69
+Installed versions: 1.4.1 1.4.0 1.3.0 20200722
70
+Other available versions: 1.4.0 1.3.0 20200722
71
+Overrides use this shell variable: CCPEM_X
72
+
73
+ Title 3 of 3: Version information for: /programs/x86_64-linux/coot
74
+
75
+Default version: 0.9.1
76
+In-use version: 0.9.1
77
+
78
+Installed versions: 0.9.1 0.8.9.2-pre-revision-7884 0.8.9 0.8.8
79
+Other available versions: 0.8.9.2-pre-revision-7884 0.8.9 0.8.8
80
+Overrides use this shell variable: COOT_X │···········
81
+```
82
+
49 83
### "What version does this coot executable come from?"
50
-Running *sbgrid-info -l* will print the available versions for a title.
84
+Using `sbapp:d` will print the title and version along with the available versions for the title.
51 85
52 86
```
53
- $ sbgrid-info -l ccp4
87
+$ coot --sbapp:d
88
+
89
+Capsule:coot using ccp4 version 7.1
90
+
54 91
Version information for: /programs/x86_64-linux/ccp4
55 92
56 93
Default version: 7.1
... ...
@@ -58,7 +95,7 @@ In-use version: 7.1
58 95
59 96
Installed versions: 7.1 7.1.006 7.0 7.0.078 6.3.0
60 97
Other available versions: 7.1.006 7.0 7.0.078 6.3.0
61
-Overrides use this shell variable: CCP4_X
98
+Overrides use this shell variable: CCP4_X │···········
62 99
```
63 100
64 101
We are running `coot` from ccp4 version 7.1 and there are several other versions available.
... ...
@@ -142,10 +179,13 @@ This is the latest version. To switch to an older version, just set the COOT_X v
142 179
[with guile 1.8.8 embedded]
143 180
```
144 181
145
-Now, let's change `coot` to come from CCP4 and check the version :
182
+To return `coot` to come from CCP4, the SBGrid default remove the config file:
146 183
147 184
```
148
-echo ccp4 > ~/.sbgrid_capsule/coot
185
+ $rm ~/.sbgrid_capsule/coot
186
+
187
+ $ coot --sbwhich
188
+/programs/x86_64-linux/ccp4/7.1/ccp4-7.1/bin/coot
149 189
150 190
$ coot --version
151 191
0.9 (revision-count 9932)