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examples.md
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| 3 | 3 | The following pages provide usage info and examples for select applications in the SBGrid environment. For access to documentation, manuals, application websites, etc, please visit : [https://sbgrid.org/software](https://sbgrid.org/software/) |
| 4 | 4 | |
| 5 | 5 | - [Arp/Warp registration](examples/arpwarp_registration) |
| 6 | + - [EMAN2 with Theano for Neural Network Particle Picking](examples/EMAN2_w_theano) |
|
| 6 | 7 | - [HADDOCK](examples/haddock) |
| 7 | 8 | - [Locscale](examples/locscale) |
| 8 | 9 | - [PHENIX - phenix.rosetta_refine](examples/phenix.rosetta_refine) |
| 9 | - |