9d3865f950494567d81fb4400196388fe1daca71
client_CLI_install.md
... | ... | @@ -40,9 +40,6 @@ The SBGrid installation client requires an individual account. To get started, f |
40 | 40 | **For large packages (Phenix, Rosetta, CCP4), a wired connection is recommended.** |
41 | 41 | Some packages are quite large and can be slow to download, especially over WiFi. |
42 | 42 | |
43 | -**pip (for python whl install only, CentOS6 systems)** |
|
44 | - pip is a package management system used to install and manage software packages written in Python. The software installation client is installable by pip. This may not be on you machine by default, instructions for adding it are included here. |
|
45 | - |
|
46 | 43 | ### Binary releases |
47 | 44 | Binary releases of the install client are recommended - there is minimal installation needed for these binaries and they can be run from any location with no dependencies. Untar the archive, make the file executable if necessary, and run from your preferred location. |
48 | 45 | |
... | ... | @@ -97,31 +94,6 @@ Additional arguments: |
97 | 94 | sbgrid: error: too few arguments |
98 | 95 | ``` |
99 | 96 | |
100 | -### Installation using pip |
|
101 | - On CentOS6, you can install pip from the EPEL repository (yum -y install python-pip) or as [per these directions](https://pip.pypa.io/en/stable/installing/) |
|
102 | - |
|
103 | -[Latest build : 1.0.694, 2018-03-21](downloads/sbgrid-1.0.694-py2-none-any.whl) |
|
104 | - |
|
105 | - $ sudo pip install SBGrid_Installer-1.0.694-py2-none-any.whl |
|
106 | - |
|
107 | -Which should produce output similar to : |
|
108 | - |
|
109 | -``` |
|
110 | -Unpacking ./SBGrid_Installer-1.0.694-py2-none-any.whl |
|
111 | -Requirement already satisfied (use --upgrade to upgrade): pyasn1 in /nfs/programs-dev/i386-mac/python/2.7.5/lib/python2.7/site-packages (from SBGrid-Installer==1.0.488) |
|
112 | -Downloading/unpacking requests (from SBGrid-Installer==1.0b2.dev412) |
|
113 | - Downloading requests-2.11.1.tar.gz (485kB): 485kB downloaded |
|
114 | - Running setup.py egg_info for package requests |
|
115 | - |
|
116 | - warning: no files found matching 'test_requests.py' |
|
117 | -Installing collected packages: SBGrid-Installer, requests |
|
118 | - Running setup.py install for requests |
|
119 | - |
|
120 | - warning: no files found matching 'test_requests.py' |
|
121 | -Successfully installed SBGrid-Installer requests |
|
122 | -Cleaning up... |
|
123 | -``` |
|
124 | - |
|
125 | 97 | ### Installation on an external drive or USB key |
126 | 98 | Currently the installer application installs the software tree in /opt/sbgrid and uses a symlink at /programs. This link is required for the software to work, but in principle the software can be located anywhere and linked to /opt/sbgrid. This functionality is not yet included in the SBGrid application, but can be set up manually with a symlink. |
127 | 99 |