3564e1742d476288fbfaa533d10a128931c4224f
gpu.md
... | ... | @@ -1,6 +1,6 @@ |
1 | 1 | ## GPU computing |
2 | 2 | |
3 | -GPU-accelerated computing uses a graphics processing unit (GPU) to accelerate computations in computer programs. Several applications in the SBGrid programs tree are GPU-accelerated. Some examples are RELION, GCTF, MotionCor2, Gautomatch, IMOD, etc. Here's what you need to take advantage of a GPU: |
|
3 | +GPU-accelerated computing uses a graphics processing unit (GPU) to accelerate computations in computer programs. Several applications in the SBGrid programs tree are GPU-accelerated. Some examples are RELION, GCTF, MotionCor2, Gautomatch, IMOD, AmberTools, etc. Here's what you need to take advantage of a GPU: |
|
4 | 4 | |
5 | 5 | ### Requirements for GPU (CUDA) applications |
6 | 6 | |
... | ... | @@ -14,7 +14,9 @@ To use GPU-accelerated applications, you will need an NVIDIA GPU. We don't curre |
14 | 14 | |
15 | 15 | You linux workstation must have the proper drivers for your GPU. You can find drivers for your card here : [https://developer.nvidia.com/cuda-zone](https://developer.nvidia.com/cuda-zone) |
16 | 16 | |
17 | -We currently support applications that rely on versions of CUDA 7.5 to 9 and these libraries are included with the SBGrid distribution. CUDA libraries do not need to be installed locally - they will not be used by SBGrid software. However, it is important to have a recent driver version if possible. |
|
17 | +We currently support applications that rely on versions of CUDA 7.5 to 10 and these libraries are included with the SBGrid distribution. CUDA libraries do not need to be installed locally - they will not be used by SBGrid software. However, it is important to have a recent driver version if possible. |
|
18 | + |
|
19 | +For information about GPU hardware and CUDA / driver version compatibility, [see this table at nvidia.com](https://docs.nvidia.com/deploy/cuda-compatibility/index.html#binary-compatibility__table-toolkit-driver) |
|
18 | 20 | |
19 | 21 | For more information on GPUs and RELION, check Erik Lindahl's blog at the Department of Biochemistry & Biophysics, Stockholm University, [http://www.cryoem.se/relion-gpu](http://www.cryoem.se/relion-gpu) |
20 | 22 |