Supported Applications

TomoNet

Description

a software package with a modern graphical user interface to carry out the entire pipeline of cryoET and subtomogram averaging to achieve high resolution.
Usage
To list all executables provided by TomoNet, run: $ sbgrid-list tomonet
Usage Notes

TomoNet provides the following callable programs:

tomoNet.py

extraction_ts.py

sta_expand.py

predict_tomo_picking_ts.py

sta_peet.py

train_picking_ts.py
Installation
Use the following command to install this title with the CLI client: $ sbgrid-cli install tomonet Available operating systems: Linux 64
Primary Citation*

H. Wang, S. Liao, X. Yu, J. Zhang, and &. Z. H. Zhou. 2024. TomoNet: A streamlined cryoET software pipeline with automatic particle picking on flexible lattices. BioRXiv.
- *Full citation information available through