Supported Applications

SIREn

Description

a toolkit for analyzing heterogeneity in 3D volume ensembles generated via cryo-EM. SIREn performs automated detection of structural blocks to allow model-free detection of heterogeneity, and additionally includes a 3D Convolutional Neural Network (CNN) to predict binarization thresholds for 3D density maps.
Usage
To list all executables provided by SIREn, run: $ sbgrid-list siren
Installation
Use the following command to install this title with the CLI client: $ sbgrid-cli install siren Available operating systems: Linux 64
Citation Note

Please cite the website: https://github.com/lkinman/SIREn