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SBGrid Installer

  • Description

    The SBGrid installation manager is the primary application for managing an SBGrid software installation. Users can choose a subset of applications for installation on their laptops or desktops or configure site installations for clusters, servers or cloud resources. This version is the command-line interface. A graphical version is available for download on the SBGrid wiki : https://sbgrid.org/wiki/client_downloads .

  • Usage

    To list all executables provided by SBGrid Installer, run: $ sbgrid-list sbgrid-installer Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install sbgrid-installer Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Webinars

    Jason Key, Ph.D. - New SBGrid GUI-based software installation manager

    Topic: New SBGrid GUI-based software installation manager
    Presenter: Jason Key, Ph.D., SBGrid, Harvard Medical School


    Recorded on April 13, 2021

    SBGrid Installation Tools  & Capsule Environment

    Topic: SBGrid Installation Tools & SBGrid Capsule Environment

    Presenters:
    Jason Key, Ph.D., SBGrid, Harvard Medical School
    Carol Herre, M.Sc., SBGrid, Harvard Medical School


    Recorded on February 9, 2021

    SBGrid Installation Client - GUI

    Topic: SBGrid GUI Installer Quick Start
    Presenter: James Vincent, SBGrid / Harvard Medical School

    Date recorded: March 30, 2020
    Music: https://www.bensound.com

    SBGrid Installation Client - CLI

    Topic: SBGrid CLI Installer Quick Start
    Presenter: James Vincent


    Recorded on: March 30, 2020

    Music: https://www.bensound.com

    Remote work and structural biology computing

    Topic: Remote work and structural biology computing
    Presenter: Pete Meyer, SBGrid/Harvard Medical School

    Link to slides:
    Remote work: https://drive.google.com/open?id=1LgF...

    Remote work AWS: https://drive.google.com/open?id=1Zlf...

    Recorded on March 27, 2020

    SBGrid Installation Tools

    What's new at SBGrid: SBGrid Installation Tools
    Presenter: Jason Key, SBGrid, Harvard Medical School

    Recorded on September 19, 2017

    SBGrid Capsules

    What's new at SBGrid: SBGrid Capsules
    Presenter: Carol Here, SBGrid, Harvard Medical School

    Host: Jason Key
    Recorded on September 19, 2017

    RAPD

    Topic: RAPD - New software for automated MX data analysis
    Presenter: Frank Murphy, Assistant Director , NE-CAT/Cornell University

    Recorded on March 30, 2017
    Host: Jason Key

    xMDFF

    Topic: xMDFF, a new molecular dynamics flexible fitting-based approach.
    Presenter: Abhishek Singharoy, Postdoctoral Fellow, Beckman Institute and University of Illinois at Urbana Champaign.

    Host: Jason Key
    Recorded on December 6, 2016

    SPI at XFELs

    Topic: SPI at XFEL's and the birth of SFX
    Presenter: Filipe R N C Maia, Laboratory of Molecular Biophysics, Uppsala University

    Host: Piotr Sliz
    Recorded on November 30, 2015

    SAXS Part II:  Advanced Applications of Biological Small Angle Scattering

    Topic: Advanced Applications of Biological Small Angle Scattering
    Presenter: Thomas Grant, Staff Scientist , BioXFEL Science and Technology Center, Hauptman-Woodward Medical Research Institute

    Host: Jason Key
    Recorded on November 18, 2014

    Getting Started with SBGrid

    Topic: Getting Started with SBGrid
    Presenter: Jason Key, SBGrid Consortium, Harvard Medical School

    Recorded on October 29, 2014

    Lecture 9: Processing Twinned and Split Crystals with RLATT

    Topic: Processing Twinned and Split Crystals with RLATT
    Presenter: Matt Benning, Bruker AXS

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    Lecture 11:  Dose-Sliced Data Collection

    Topic: Dose-Sliced Data Collection
    Presenter: Raj Rajashankar, NE-CAT, APS, Cornell University

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    Lecture 10:  Optimizing Data Collection with Micro-Diffraction Tools

    Topic: Optimizing Data Collection with Micro-Diffraction Tools
    Presenter: Jon Schuermann, NE-CAT

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    Lecture 15: RAPD

    Topic: RAPD
    Presenter: Frank Murphy, NE-CAT

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    Faster and smaller macromolecular crystallography at Diamond Light Source

    Topic: Hot beams and cool crystals. Faster and smaller macromolecular crystallography at Diamond Light Source
    Presenter: Robin Owen, Principal Beamline Scientist, I24 Diamond Light Source.

    Host: Goran Malojcic
    Recorded on July 25, 2014

    Lecture 13:  Getting the most from remote data collection.

    Topic: Getting the most from remote data collection.
    Presenter: David Neau, NE-CAT

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    Lecture 12:  Data collection using Hybrid Photon Counting Pixel Detectors

    Topic: Data collection using Hybrid Photon Counting Pixel Detectors
    Presenter: Clemens Schulze-Bries, DECTRIS

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    Lecture 5:  Data Processing Tools in the SBGrid Collection

    Topic: Data Processing Tools in the SBGrid Collection
    Presenter: Piotr Sliz, Harvard Medical School/SBGrid Consortium

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    Lecture 1: The Diffraction Experiment: Crystals, Beams, Images, and Reflections

    Topic: The Diffraction Experiment: Crystals, Beams, Images, and Reflections
    Presenter: Jim Pflugrath

    Presented as part of:
    SBGrid/NE-CAT 2014: Data Processing in Crystallography
    June 5-6, 2014

    SAXS Part I: Introduction to Biological Small Angle Scattering

    Topic: SAXS Part I: Introduction to Biological Small Angle Scattering
    Presenter: Thomas Grant, Postdoctoral Scholar from the Hauptman-Woodward Medical Research Institute

    Host: Jason Key
    Recorded on March 21, 2014

    Enhance Success of Crystallization: Maximize Hits & Improve Crystal Quality

    Topic: Simple Ways to Enhance the Success of Crystallization Trials: Part II - Dynamic Experiments to Maximize Hits and Improve Crystal Quality
    Presenter: Naomi Chayen, Professor, Imperial College London

    SBGrid Host: Jason Key
    Recorded on December 4, 2013

    Enhance Success of Crystallization: Choosing Crystallization Method

    Topic: Simple Ways to Enhance the Success of Crystallization Trials: Part III - Choosing your Method of Crystallization
    Presenter: Naomi Chayen, Professor, Imperial College London

    Host: Jason Key
    Recorded on December 4, 2013

    Enhance Success of Crystallization: Practical Crystallization Techniques

    Topic: Simple Ways to Enhance the Success of Crystallization Trials: Part I - Practical Crystallization Techniques
    Presenter: Naomi Chayen, Professor, Imperial College London

    Recorded on: December 4, 2013

  • Keywords

    Other

  • Default Versions

    Linux 64:  2.9.9 (52.5 MB)
    OS X INTEL:  2.9.9 (57.3 MB)

  • Other Versions

      Linux 64:

      2.6.17 (52.0 MB) , 2.9.3 (52.5 MB) , 2.9.4 (52.5 MB) , 2.9.5 (52.5 MB) , 2.9.7 (52.5 MB) , 2.9.8 (52.5 MB) , latest (1.3 KB)
    • OS X INTEL:

      2.6.17 (56.8 MB) , 2.9.3 (57.3 MB) , 2.9.4 (57.3 MB) , 2.9.5 (57.3 MB) , 2.9.7 (57.3 MB) , 2.9.8 (57.3 MB) , latest (1.2 KB)
  • Developers

    Piotr Sliz, Pete A Meyer, Jason Key

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