Supported Applications
RFdiffusion2
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Description
is an atom-level enzyme active site scaffolding tool that generates protein backbones conditioned on atomic motifs and small molecules. The software supports enzyme design from atomic motifs with unknown sequence positions, small-molecule binder design with RASA conditioning, and includes integration with LigandMPNN for sequence fitting and Chai1 for structure validation. It provides both indexed backbone and unindexed atomized region outputs with optional idealization steps for enhanced structural quality.
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Usage
To list all executables provided by RFdiffusion2, run:$ sbgrid-list rfdiffusion2 -
Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install rfdiffusion2Available operating systems: Linux 64
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Keywords
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Default Versions
Linux 64:  20251028 (34.0 GB)